RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 ANGEL2Q5VTE6 544 aaKnown RBP29.77■■■□□ 2.36
PFDN2-201ENST00000368010 CST9Q5W186 159 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 FBXO33Q7Z6M2 555 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 ITPRIPQ8IWB1 547 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 SULF1Q8IWU6 871 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 JAG2Q9Y219 1238 aa29.77■■■□□ 2.36
PFDN2-201ENST00000368010 SLC5A1P13866 664 aa29.76■■■□□ 2.35
PFDN2-201ENST00000368010 LPIN2Q92539 896 aa29.76■■■□□ 2.35
PFDN2-201ENST00000368010 ZNF408Q9H9D4 720 aa29.76■■■□□ 2.35
PFDN2-201ENST00000368010 CEP126Q9P2H0 1117 aa29.76■■■□□ 2.35
PFDN2-201ENST00000368010 TRPM7Q96QT4 1865 aa29.76■■■□□ 2.35
PFDN2-201ENST00000368010 ADM5C9JUS6 153 aa29.75■■■□□ 2.35
PFDN2-201ENST00000368010 RLBP1P12271 317 aa29.75■■■□□ 2.35
PFDN2-201ENST00000368010 RASSF10A6NK89 507 aa29.74■■■□□ 2.35
PFDN2-201ENST00000368010 PITPNM2Q9BZ72 1349 aa29.73■■■□□ 2.35
PFDN2-201ENST00000368010 WNT10BO00744 389 aa29.73■■■□□ 2.35
PFDN2-201ENST00000368010 NBPF9Q3BBW0 867 aa29.73■■■□□ 2.35
PFDN2-201ENST00000368010 RCAN3Q9UKA8 241 aa29.73■■■□□ 2.35
PFDN2-201ENST00000368010 F8W031 263 aaPredicted RBP29.72■■■□□ 2.35
PFDN2-201ENST00000368010 FRAT2O75474 233 aaPredicted RBP29.72■■■□□ 2.35
PFDN2-201ENST00000368010 MS4A1P11836 297 aa29.72■■■□□ 2.35
PFDN2-201ENST00000368010 ATP2B3Q16720 1220 aa29.72■■■□□ 2.35
PFDN2-201ENST00000368010 DEFB115Q30KQ5 88 aa29.72■■■□□ 2.35
PFDN2-201ENST00000368010 MFSD14BQ5SR56 506 aa29.72■■■□□ 2.35
PFDN2-201ENST00000368010 BCAMP50895 628 aa29.71■■■□□ 2.35
PFDN2-201ENST00000368010 DLK2Q6UY11 383 aa29.71■■■□□ 2.35
PFDN2-201ENST00000368010 IQSEC3Q9UPP2 1182 aaPredicted RBP29.71■■■□□ 2.35
PFDN2-201ENST00000368010 TLL2Q9Y6L7 1015 aa29.71■■■□□ 2.35
PFDN2-201ENST00000368010 PNMA6EA0A0J9YXQ4 647 aa29.69■■■□□ 2.34
PFDN2-201ENST00000368010 ZBTB7BO15156 539 aaPredicted RBP29.69■■■□□ 2.34
PFDN2-201ENST00000368010 CHAF1AQ13111 956 aaPredicted RBP29.69■■■□□ 2.34
PFDN2-201ENST00000368010 DLGAP5Q15398 846 aa29.69■■■□□ 2.34
PFDN2-201ENST00000368010 PANK1Q8TE04 598 aa29.69■■■□□ 2.34
PFDN2-201ENST00000368010 VEGFBP49765 207 aa29.68■■■□□ 2.34
PFDN2-201ENST00000368010 ZBED3Q96IU2 234 aaPredicted RBP29.68■■■□□ 2.34
PFDN2-201ENST00000368010 PAXIP1Q6ZW49 1069 aaPredicted RBP29.67■■■□□ 2.34
PFDN2-201ENST00000368010 SAPCD2Q86UD0 394 aa29.67■■■□□ 2.34
PFDN2-201ENST00000368010 MTMR14Q8NCE2 650 aa29.67■■■□□ 2.34
PFDN2-201ENST00000368010 TBC1D22AQ8WUA7 517 aa29.67■■■□□ 2.34
PFDN2-201ENST00000368010 CDCA5Q96FF9 252 aa29.67■■■□□ 2.34
PFDN2-201ENST00000368010 C1orf115Q9H7X2 142 aa29.67■■■□□ 2.34
PFDN2-201ENST00000368010 POLR2AP24928 1970 aaKnown RBP29.65■■■□□ 2.34
PFDN2-201ENST00000368010 CFAP100Q494V2 611 aa29.65■■■□□ 2.34
PFDN2-201ENST00000368010 TTF2Q9UNY4 1162 aaKnown RBP29.65■■■□□ 2.34
PFDN2-201ENST00000368010 ARAP2Q8WZ64 1704 aa29.65■■■□□ 2.34
PFDN2-201ENST00000368010 APOBEC3FQ8IUX4 373 aaKnown RBP29.64■■■□□ 2.34
PFDN2-201ENST00000368010 GBA2Q9HCG7 927 aaPredicted RBP29.64■■■□□ 2.34
PFDN2-201ENST00000368010 ECE1P42892 770 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 RBM5P52756 815 aaKnown RBP eCLIP29.63■■■□□ 2.33
PFDN2-201ENST00000368010 ATP8B2P98198 1209 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 TFCP2Q12800 502 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 G3BP1Q13283 466 aaKnown RBP eCLIP29.63■■■□□ 2.332e-6■□□□□ 9.7
PFDN2-201ENST00000368010 C2orf69Q8N8R5 385 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 HHIPL1Q96JK4 782 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 GNL3LQ9NVN8 582 aaKnown RBP29.63■■■□□ 2.33
PFDN2-201ENST00000368010 SCAF8Q9UPN6 1271 aaKnown RBP29.63■■■□□ 2.33
PFDN2-201ENST00000368010 AKAP2Q9Y2D5 859 aa29.63■■■□□ 2.33
PFDN2-201ENST00000368010 WDR33Q9C0J8 1336 aaKnown RBP29.63■■■□□ 2.33
PFDN2-201ENST00000368010 SPDYE2BA6NHP3 402 aa29.62■■■□□ 2.33
PFDN2-201ENST00000368010 MYO1BO43795 1136 aa29.62■■■□□ 2.33
PFDN2-201ENST00000368010 SPDYE6P0CI01 402 aa29.62■■■□□ 2.33
PFDN2-201ENST00000368010 POLA2Q14181 598 aa29.62■■■□□ 2.33
PFDN2-201ENST00000368010 CAPNS2Q96L46 248 aa29.62■■■□□ 2.33
PFDN2-201ENST00000368010 CYP4F22Q6NT55 531 aa29.61■■■□□ 2.33
PFDN2-201ENST00000368010 SSH3Q8TE77 659 aa29.61■■■□□ 2.33
PFDN2-201ENST00000368010 SERPINA10Q9UK55 444 aa29.61■■■□□ 2.33
PFDN2-201ENST00000368010 PCDHAC2Q9Y5I4 1007 aa29.61■■■□□ 2.33
PFDN2-201ENST00000368010 A0A1B0GUL7 405 aa29.6■■■□□ 2.33
PFDN2-201ENST00000368010 HUNKP57058 714 aa29.6■■■□□ 2.33
PFDN2-201ENST00000368010 GRM1Q13255 1194 aa29.6■■■□□ 2.33
PFDN2-201ENST00000368010 MVPQ14764 893 aaKnown RBP29.6■■■□□ 2.33
PFDN2-201ENST00000368010 PRMT6Q96LA8 375 aaPredicted RBP29.6■■■□□ 2.33
PFDN2-201ENST00000368010 HSPA1AP0DMV8 641 aaKnown RBP29.59■■■□□ 2.33
PFDN2-201ENST00000368010 HSPA1BP0DMV9 641 aaKnown RBP29.59■■■□□ 2.33
PFDN2-201ENST00000368010 ADORA1P30542 326 aa29.59■■■□□ 2.33
PFDN2-201ENST00000368010 TIMM10P62072 90 aa29.59■■■□□ 2.33
PFDN2-201ENST00000368010 WDR66Q8TBY9 1149 aa29.59■■■□□ 2.33
PFDN2-201ENST00000368010 SUGT1Q9Y2Z0 365 aa29.59■■■□□ 2.33
PFDN2-201ENST00000368010 SEMA3EO15041 775 aa29.58■■■□□ 2.33
PFDN2-201ENST00000368010 PHKA1P46020 1223 aa29.58■■■□□ 2.33
PFDN2-201ENST00000368010 GRIK5Q16478 980 aa29.58■■■□□ 2.33
PFDN2-201ENST00000368010 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.58■■■□□ 2.33
PFDN2-201ENST00000368010 DDX19BQ9UMR2 479 aa29.58■■■□□ 2.33
PFDN2-201ENST00000368010 COL1A1P02452 1464 aaPredicted RBP29.57■■■□□ 2.32
PFDN2-201ENST00000368010 CLRN2A0PK11 232 aa29.57■■■□□ 2.32
PFDN2-201ENST00000368010 CRKP46108 304 aa29.57■■■□□ 2.32
PFDN2-201ENST00000368010 CCDC102BQ68D86 513 aa29.57■■■□□ 2.32
PFDN2-201ENST00000368010 COG6Q9Y2V7 657 aa29.57■■■□□ 2.32
PFDN2-201ENST00000368010 MAST3O60307 1309 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 FKBP1BP68106 108 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 HDLBPQ00341 1268 aaKnown RBP29.56■■■□□ 2.32
PFDN2-201ENST00000368010 OS9Q13438 667 aaPredicted RBP29.56■■■□□ 2.32
PFDN2-201ENST00000368010 PRAMEF18Q5VWM3 479 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 CEP85Q6P2H3 762 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 XAGE2Q96GT9 111 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 DENND2AQ9ULE3 1009 aa29.56■■■□□ 2.32
PFDN2-201ENST00000368010 SURF6O75683 361 aaKnown RBP29.55■■■□□ 2.32
PFDN2-201ENST00000368010 NF2P35240 595 aa29.55■■■□□ 2.32
PFDN2-201ENST00000368010 NEUROD6Q96NK8 337 aa29.55■■■□□ 2.32
PFDN2-201ENST00000368010 VEZTQ9HBM0 779 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms