RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 CNNM3Q8NE01 707 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 ZNF592Q92610 1267 aa8.38□□□□□ -1.07
VTA1-202ENST00000367630 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ZBTB43O43298 467 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 SYKP43405 635 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 NLRP12P59046 1061 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ADALQ6DHV7 355 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 MFSD6Q6ZSS7 791 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 Q6ZUG5 572 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 XAGE3Q8WTP9 111 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 TRIM34Q9BYJ4 488 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 PPP6R2O75170 966 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 NUP58Q9BVL2 599 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 CNPY2Q9Y2B0 182 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 USP16Q9Y5T5 823 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 SIGLEC1Q9BZZ2 1709 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 hCG_1984214I3L0E3 225 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ZNF75DP51815 510 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ZNF713Q8N859 430 aaPredicted RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 NBPF7P0C2Y1 421 aaPredicted RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 KRT83P78385 493 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ATP2B3Q16720 1220 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ADCY9O60503 1353 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 TSPOAP1O95153 1857 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 DEXIO95424 95 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 UTP14CQ5TAP6 766 aaKnown RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 MICALCLQ6ZW33 695 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 RUBCNQ92622 972 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 MYO1AQ9UBC5 1043 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 CCDC172P0C7W6 258 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 ANO6Q4KMQ2 910 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 CROCCP2Q86T23 111 aa8.37□□□□□ -1.07
VTA1-202ENST00000367630 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 TTF2Q9UNY4 1162 aaKnown RBP8.37□□□□□ -1.07
VTA1-202ENST00000367630 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 NEURL1BA8MQ27 555 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 MYL5Q02045 173 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 STXBP4Q6ZWJ1 553 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 SNRKQ9NRH2 765 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 UBE3CQ15386 1083 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 ARHGEF25Q86VW2 580 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 CDHR2Q9BYE9 1310 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 PRR36Q9H6K5 1346 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 BAG3O95817 575 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 TRAPPC10P48553 1259 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 LEO1Q8WVC0 666 aaPredicted RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 MED23Q9ULK4 1368 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 PTPDC1A2A3K4 754 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 PRPHP41219 470 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 ARHGAP29Q52LW3 1261 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 VPS36Q86VN1 386 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 BRF1Q92994 677 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 ZNF512BQ96KM6 892 aaPredicted RBP8.36□□□□□ -1.07
VTA1-202ENST00000367630 RTEL1Q9NZ71 1219 aa8.36□□□□□ -1.07
VTA1-202ENST00000367630 MYL6BP14649 208 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 CUEDC2Q9H467 287 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 PPP1R12BO60237 982 aaPredicted RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 PCCAP05165 728 aaPredicted RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 CYLC1P35663 651 aaPredicted RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 BICC1Q9H694 974 aaKnown RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.35□□□□□ -1.07
VTA1-202ENST00000367630 LAD1O00515 517 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 NDC80O14777 642 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 WTAPQ15007 396 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 DENND2AQ9ULE3 1009 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 TMEM67Q5HYA8 995 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 MTMR6Q9Y217 621 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 RTN1Q16799 776 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 SIL1Q9H173 461 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 ARHGAP6O43182 974 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 PRC1O43663 620 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 CCDC175P0C221 793 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 EPS15P42566 896 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 SPA17Q15506 151 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 COPS6Q7L5N1 327 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 CCDC8Q9H0W5 538 aaPredicted RBP8.35□□□□□ -1.07
VTA1-202ENST00000367630 DACT1Q9NYF0 836 aa8.35□□□□□ -1.07
VTA1-202ENST00000367630 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
VTA1-202ENST00000367630 CAGE1Q8TC20 777 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms