RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 PRAMEF22A3QJZ6 481 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 EIF3CLB5ME19 914 aaKnown RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 MCM3P25205 808 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 EIF3CQ99613 913 aaKnown RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 ZNHIT6Q9NWK9 470 aaKnown RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 PNMA6AP0CW24 399 aaPredicted RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 CLCN6P51797 869 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 UBASH3AP57075 661 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 SATB1Q01826 763 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 CBX8Q9HC52 389 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 PRDM11Q9NQV5 511 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 IQCEQ6IPM2 695 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 UBE3BQ7Z3V4 1068 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 IP6K1Q92551 441 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRKN-206ENST00000366898 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
PRKN-206ENST00000366898 CD163L1Q9NR16 1453 aa13.4□□□□□ -0.26
PRKN-206ENST00000366898 BUB1BO60566 1050 aaPredicted RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 RPUSD2Q8IZ73 545 aaKnown RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 TACO1Q9BSH4 297 aaKnown RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 KIF5BP33176 963 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 NEDD9Q14511 834 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 HLTFQ14527 1009 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRKN-206ENST00000366898 COPS6Q7L5N1 327 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 GOLGA6L9A6NEM1 432 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 XAGE3Q8WTP9 111 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 SUDS3Q9H7L9 328 aaPredicted RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 MYO3AQ8NEV4 1616 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 F13A1P00488 732 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
PRKN-206ENST00000366898 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
PRKN-206ENST00000366898 BCAS4Q8TDM0 211 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 SOS1Q07889 1333 aaPredicted RBP13.38□□□□□ -0.27
PRKN-206ENST00000366898 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 A0A087WUV0 522 aaPredicted RBP13.38□□□□□ -0.27
PRKN-206ENST00000366898 CTAGE5O15320 804 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 CAVIN2O95810 425 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
PRKN-206ENST00000366898 TRIM6Q9C030 488 aaPredicted RBP13.38□□□□□ -0.27
PRKN-206ENST00000366898 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
PRKN-206ENST00000366898 PROSER3Q2NL68 480 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 AKAP4Q5JQC9 854 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 EFCAB13Q8IY85 973 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
PRKN-206ENST00000366898 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
PRKN-206ENST00000366898 A0A087WZG4 1122 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
PRKN-206ENST00000366898 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 HSF2BPO75031 334 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 CNNM3Q8NE01 707 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 CAPZA3Q96KX2 299 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 NUCKS1Q9H1E3 243 aaKnown RBP13.36□□□□□ -0.27
PRKN-206ENST00000366898 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
PRKN-206ENST00000366898 GOLGA6CA6NDK9 693 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 GOLGA6DP0CG33 693 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
PRKN-206ENST00000366898 IFFO1Q0D2I5 559 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 GOLGA6AQ9NYA3 693 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 IGSF1Q8N6C5 1336 aa13.36□□□□□ -0.27
PRKN-206ENST00000366898 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
PRKN-206ENST00000366898 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
PRKN-206ENST00000366898 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
PRKN-206ENST00000366898 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
PRKN-206ENST00000366898 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 CYP2C19P33261 490 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 PCK1P35558 622 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 LRRFIP1Q32MZ4 808 aaKnown RBP13.35□□□□□ -0.27
PRKN-206ENST00000366898 TTC19Q6DKK2 380 aaPredicted RBP13.35□□□□□ -0.27
PRKN-206ENST00000366898 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
PRKN-206ENST00000366898 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
PRKN-206ENST00000366898 KIF2CQ99661 725 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 DIXDC1Q155Q3 683 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 CPLX4Q7Z7G2 160 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 TBC1D31Q96DN5 1066 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 GRM8O00222 908 aa13.35□□□□□ -0.27
PRKN-206ENST00000366898 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms