RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SEC31BQ9NQW1 1179 aa14.1□□□□□ -0.15
CSNK1E-202ENST00000366216 ATP5J2-PTCD1G3V325 749 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 NF2P35240 595 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 ARMC5Q96C12 935 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 MXD3Q9BW11 206 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 PTPN22Q9Y2R2 807 aa14.09□□□□□ -0.15
CSNK1E-202ENST00000366216 PTPN12Q05209 780 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-202ENST00000366216 NBPF9Q3BBW0 867 aa14.08□□□□□ -0.16
CSNK1E-202ENST00000366216 STK31Q9BXU1 1019 aa14.08□□□□□ -0.16
CSNK1E-202ENST00000366216 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
CSNK1E-202ENST00000366216 ZSWIM8A7E2V4 1837 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 UFL1O94874 794 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 SPRYD7Q5W111 196 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 ITPRIPQ8IWB1 547 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 ERO1AQ96HE7 468 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
CSNK1E-202ENST00000366216 ARMC9Q7Z3E5 817 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 SLC17A8Q8NDX2 589 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 ZBTB40Q9NUA8 1239 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 CHPF2Q9P2E5 772 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
CSNK1E-202ENST00000366216 MANSC4A6NHS7 340 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 H0YGN5 161 aa14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 INHBEP58166 350 aa14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 HDGFL1Q5TGJ6 251 aa14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 GGA1Q9UJY5 639 aa14.05□□□□□ -0.16
CSNK1E-202ENST00000366216 USP17L3A6NCW0 530 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 USP17L4A6NCW7 530 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 IRS4O14654 1257 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 ZBTB7BO15156 539 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 PRKG1Q13976 671 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 LDLRAD1Q5T700 205 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 USP17L1Q7RTZ2 530 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 CD99L2Q8TCZ2 262 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 JARID2Q92833 1246 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
CSNK1E-202ENST00000366216 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
CSNK1E-202ENST00000366216 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
CSNK1E-202ENST00000366216 EFCC1Q9HA90 598 aa14.03□□□□□ -0.16
CSNK1E-202ENST00000366216 ANGEL1Q9UNK9 670 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-202ENST00000366216 IGF2BP3O00425 579 aaKnown RBP eCLIP14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 WNT10BO00744 389 aa14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 FLIIQ13045 1269 aa14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 G2E3Q7L622 706 aa14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 OGFOD1Q8N543 542 aa14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 RWDD1Q9H446 243 aaPredicted RBP14.02□□□□□ -0.17
CSNK1E-202ENST00000366216 SSC5DA1L4H1 1573 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 COL1A1P02452 1464 aaPredicted RBP14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 IGHDP01880 384 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 CRHR2Q13324 411 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 HDAC1Q13547 482 aaPredicted RBP14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 DACT2Q5SW24 774 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 APOBEC3FQ8IUX4 373 aaKnown RBP14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 CCDC85AQ96PX6 553 aaPredicted RBP14.01□□□□□ -0.17
CSNK1E-202ENST00000366216 MGAMO43451 1857 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 SASH1O94885 1247 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
CSNK1E-202ENST00000366216 SLC4A8Q2Y0W8 1093 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 SLC9C1Q4G0N8 1177 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 NBPF11Q86T75 865 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 WNK4Q96J92 1243 aa14□□□□□ -0.17
CSNK1E-202ENST00000366216 RBM27Q9P2N5 1060 aaKnown RBP14□□□□□ -0.17
CSNK1E-202ENST00000366216 DBF4Q9UBU7 674 aaPredicted RBP14□□□□□ -0.17
CSNK1E-202ENST00000366216 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 XDHP47989 1333 aa13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 SP3Q02447 781 aa13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 ZBED3Q96IU2 234 aaPredicted RBP13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.99□□□□□ -0.17
CSNK1E-202ENST00000366216 ALPK3Q96L96 1907 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 AOX1Q06278 1338 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 MYO3BQ8WXR4 1341 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 GJA5P36382 358 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 PCDHAC2Q9Y5I4 1007 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 UNC80Q8N2C7 3258 aa13.98□□□□□ -0.17
CSNK1E-202ENST00000366216 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 KLRK1P26718 216 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 MMP14P50281 582 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
CSNK1E-202ENST00000366216 PTCH2Q9Y6C5 1203 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms