RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SASH1O94885 1247 aa17.21■□□□□ 0.34
TNFRSF1A-202ENST00000366159 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.34
TNFRSF1A-202ENST00000366159 NOGQ13253 232 aa17.21■□□□□ 0.34
TNFRSF1A-202ENST00000366159 LRRC24Q50LG9 513 aa17.21■□□□□ 0.34
TNFRSF1A-202ENST00000366159 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-202ENST00000366159 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
TNFRSF1A-202ENST00000366159 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-202ENST00000366159 FKBP1BP68106 108 aa17.2■□□□□ 0.34
TNFRSF1A-202ENST00000366159 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PAPPA2Q9BXP8 1791 aa17.19■□□□□ 0.34
TNFRSF1A-202ENST00000366159 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
TNFRSF1A-202ENST00000366159 CCDC102AQ96A19 550 aa17.19■□□□□ 0.34
TNFRSF1A-202ENST00000366159 CA12O43570 354 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PDE8BO95263 885 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 SLC10A3P09131 477 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 GYG1P46976 350 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PRAMEF18Q5VWM3 479 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
TNFRSF1A-202ENST00000366159 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-202ENST00000366159 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
TNFRSF1A-202ENST00000366159 API5Q9BZZ5 524 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PCDHAC2Q9Y5I4 1007 aa17.17■□□□□ 0.34
TNFRSF1A-202ENST00000366159 FGFR2P21802 821 aa17.16■□□□□ 0.34
TNFRSF1A-202ENST00000366159 MOB2Q70IA6 237 aa17.16■□□□□ 0.34
TNFRSF1A-202ENST00000366159 MIER1Q8N108 512 aa17.16■□□□□ 0.34
TNFRSF1A-202ENST00000366159 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
TNFRSF1A-202ENST00000366159 ECM29Q5VYK3 1845 aa17.16■□□□□ 0.34
TNFRSF1A-202ENST00000366159 AOX1Q06278 1338 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 KIF23Q02241 960 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 RASAL3Q86YV0 1011 aa17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 APOBEC3FQ8IUX4 373 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 PRMT6Q96LA8 375 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-202ENST00000366159 COL1A1P02452 1464 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 ARAP2Q8WZ64 1704 aa17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 EYA2O00167 538 aa17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 TSKSQ9UJT2 592 aa17.14■□□□□ 0.33
TNFRSF1A-202ENST00000366159 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-202ENST00000366159 MFSD14BQ5SR56 506 aa17.13■□□□□ 0.33
TNFRSF1A-202ENST00000366159 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
TNFRSF1A-202ENST00000366159 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
TNFRSF1A-202ENST00000366159 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
TNFRSF1A-202ENST00000366159 UBE2Q2LH0YL09 131 aa17.12■□□□□ 0.33
TNFRSF1A-202ENST00000366159 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1A-202ENST00000366159 SERPINA10Q9UK55 444 aa17.12■□□□□ 0.33
TNFRSF1A-202ENST00000366159 BCAMP50895 628 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 PUM3Q15397 648 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 GRIK5Q16478 980 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 MEIS3Q99687 375 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 SAGE1Q9NXZ1 904 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 SSC5DA1L4H1 1573 aa17.11■□□□□ 0.33
TNFRSF1A-202ENST00000366159 CIAO1O76071 339 aa17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 NF2P35240 595 aa17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 TTF2Q9UNY4 1162 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 IQSEC3Q9UPP2 1182 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 LRRFIP2Q9Y608 721 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1A-202ENST00000366159 BCAR3O75815 825 aa17.09■□□□□ 0.33
TNFRSF1A-202ENST00000366159 LPIN2Q92539 896 aa17.09■□□□□ 0.33
TNFRSF1A-202ENST00000366159 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
TNFRSF1A-202ENST00000366159 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
TNFRSF1A-202ENST00000366159 CLRN2A0PK11 232 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 MYO1BO43795 1136 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CAPN15O75808 1086 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TRIM27P14373 513 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TBC1D22AQ8WUA7 517 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ZBTB22O15209 634 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CRKP46108 304 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 MTX1Q13505 466 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 AKAP11Q9UKA4 1901 aa17.07■□□□□ 0.32
TNFRSF1A-202ENST00000366159 CASP8AP2Q9UKL3 1982 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 TRPA1O75762 1119 aa17.06■□□□□ 0.32
TNFRSF1A-202ENST00000366159 GNAI3P08754 354 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms