RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 MED14O60244 1454 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-202ENST00000361603 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 BAG6P46379 1132 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 SCLT1Q96NL6 688 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 NEURL1BA8MQ27 555 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 SYKP43405 635 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 CAMK4Q16566 473 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 PDCL2Q8N4E4 241 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 ATP5JP18859 108 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 NAPAP54920 295 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
COL4A5-202ENST00000361603 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-202ENST00000361603 SMARCC2Q8TAQ2 1214 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 H0YIN7 160 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 UFL1O94874 794 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 KIF5CO60282 957 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 EHBP1Q8NDI1 1231 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 H0YHG0 523 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
COL4A5-202ENST00000361603 FILIP1Q7Z7B0 1213 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 ZC3H13Q5T200 1668 aaKnown RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 NT5C2P49902 561 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 MBD4O95243 580 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 MTIF2P46199 727 aaKnown RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 SEPT11Q9NVA2 429 aaKnown RBP13.05□□□□□ -0.32
COL4A5-202ENST00000361603 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
COL4A5-202ENST00000361603 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 TEX11Q8IYF3 940 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 SEMA3EO15041 775 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 CIAO1O76071 339 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 RPS6KB1P23443 525 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 ALKQ9UM73 1620 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 ESPNB1AK53 854 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 GLI2P10070 1586 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 SGSM2O43147 1006 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 DEXIO95424 95 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 AK2P54819 239 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 CTSWP56202 376 aa13.04□□□□□ -0.32
COL4A5-202ENST00000361603 IFI16Q16666 785 aaKnown RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 C16orf71Q8IYS4 520 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-202ENST00000361603 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-202ENST00000361603 STAT6P42226 847 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 PCP11498 1178 aaKnown RBP13.03□□□□□ -0.32
COL4A5-202ENST00000361603 PICALMQ13492 652 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 SPTLC2O15270 562 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 A1BGP04217 495 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ALS2CR12Q96Q35 445 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ERBB3P21860 1342 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ZNF165P49910 485 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
COL4A5-202ENST00000361603 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
COL4A5-202ENST00000361603 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 BICDL2A1A5D9 508 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 PSMA7O14818 248 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 PTPN14Q15678 1187 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 LEKR1Q6ZMV7 388 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 SPATA5Q8NB90 893 aa13.02□□□□□ -0.32
COL4A5-202ENST00000361603 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
COL4A5-202ENST00000361603 ARPP21Q9UBL0 812 aaPredicted RBP13.02□□□□□ -0.33
COL4A5-202ENST00000361603 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms