RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHANK1-202ENST00000359082 ZNF569Q5MCW4 686 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 RBM26Q5T8P6 1007 aaKnown RBP20.78■□□□□ 0.92
SHANK1-202ENST00000359082 KCNK9Q9NPC2 374 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 CCDC121Q6ZUS5 278 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 VPS18Q9P253 973 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 RHOXF2BP0C7M4 288 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 RXRAP19793 462 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 PPP1R7Q15435 360 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 KRT79Q5XKE5 535 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
SHANK1-202ENST00000359082 RHOXF2Q9BQY4 288 aa20.78■□□□□ 0.92
SHANK1-202ENST00000359082 MAP3K1Q13233 1512 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 TRIM75PA6NK02 468 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 ANAPC4Q9UJX5 808 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 KRT86O43790 486 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 IVLP07476 585 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 MICALL1Q8N3F8 863 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 BICDL2A1A5D9 508 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
SHANK1-202ENST00000359082 GRM8O00222 908 aa20.77■□□□□ 0.91
SHANK1-202ENST00000359082 TPD52P55327 224 aaPredicted RBP20.77■□□□□ 0.91
SHANK1-202ENST00000359082 SP4Q02446 784 aa20.77■□□□□ 0.91
SHANK1-202ENST00000359082 IL16Q14005 1332 aa20.77■□□□□ 0.91
SHANK1-202ENST00000359082 NCBP1Q09161 790 aaKnown RBP20.76■□□□□ 0.91
SHANK1-202ENST00000359082 HDAC1Q13547 482 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-202ENST00000359082 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 TRAF1Q13077 416 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 PPP1R9BQ96SB3 815 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 ZWINTO95229 277 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 DCAF17Q5H9S7 520 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-202ENST00000359082 ODF2LQ9ULJ1 636 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 RIMBP2O15034 1052 aa20.76■□□□□ 0.91
SHANK1-202ENST00000359082 GTF2A1P52655 376 aaPredicted RBP20.76■□□□□ 0.91
SHANK1-202ENST00000359082 TTC14Q96N46 770 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 NLRP3Q96P20 1036 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 JAG2Q9Y219 1238 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 TYRO3Q06418 890 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 RAPGEF1Q13905 1077 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.75■□□□□ 0.91
SHANK1-202ENST00000359082 MCM9Q9NXL9 1143 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 MAK16Q9BXY0 300 aaKnown RBP20.75■□□□□ 0.91
SHANK1-202ENST00000359082 ATP6V0A2Q9Y487 856 aa20.75■□□□□ 0.91
SHANK1-202ENST00000359082 RNF113AO15541 343 aaKnown RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 ZEB2O60315 1214 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 SLU7O95391 586 aaKnown RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 IL15P40933 162 aaPredicted RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 CFAP58Q5T655 872 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 SEC62Q99442 399 aaKnown RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 NAP1L3Q99457 506 aaPredicted RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 PKD2L1Q9P0L9 805 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 TXNDC16Q9P2K2 825 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 FAM169AQ9Y6X4 670 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 CAPN2P17655 700 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 UBLCP1Q8WVY7 318 aaPredicted RBP20.74■□□□□ 0.91
SHANK1-202ENST00000359082 CTNND2Q9UQB3 1225 aa20.74■□□□□ 0.91
SHANK1-202ENST00000359082 TLDC2A0PJX2 215 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 IFNKQ9P0W0 207 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 KRT5P13647 590 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 IDI1Q13907 227 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 AK2P54819 239 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 ZKSCAN3Q9BRR0 538 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 BICRAQ9NZM4 1560 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 SH3BP5O60239 455 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 CFAP157Q5JU67 520 aa20.73■□□□□ 0.91
SHANK1-202ENST00000359082 SYT10Q6XYQ8 523 aa20.72■□□□□ 0.91
SHANK1-202ENST00000359082 TFCP2Q12800 502 aa20.72■□□□□ 0.91
SHANK1-202ENST00000359082 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-202ENST00000359082 ATP2A2P16615 1042 aaKnown RBP20.72■□□□□ 0.91
SHANK1-202ENST00000359082 UAP1Q16222 522 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-202ENST00000359082 CEP83Q9Y592 693 aa20.72■□□□□ 0.91
SHANK1-202ENST00000359082 CEP57Q86XR8 500 aa20.72■□□□□ 0.91
SHANK1-202ENST00000359082 GNAT2P19087 354 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 CALML3P27482 149 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
SHANK1-202ENST00000359082 KSR2Q6VAB6 950 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 CPLX4Q7Z7G2 160 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 DZIP3Q86Y13 1208 aaKnown RBP20.71■□□□□ 0.91
SHANK1-202ENST00000359082 SAP30BPQ9UHR5 308 aaKnown RBP20.71■□□□□ 0.91
SHANK1-202ENST00000359082 PTPDC1A2A3K4 754 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 CREB3L3Q68CJ9 461 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 DTHD1Q6ZMT9 781 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 PROCA1Q8NCQ7 364 aaPredicted RBP20.71■□□□□ 0.91
SHANK1-202ENST00000359082 CLCN1P35523 988 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 MSANTD4Q8NCY6 345 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 SNX16P57768 344 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 TAF12Q16514 161 aa20.71■□□□□ 0.91
SHANK1-202ENST00000359082 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 SEL1L2Q5TEA6 688 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 ANKRD44Q8N8A2 993 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 HS2ST1Q7LGA3 356 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 TSGA10Q9BZW7 698 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 NYXQ9GZU5 481 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 RASA3Q14644 834 aa20.7■□□□□ 0.9
SHANK1-202ENST00000359082 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms