RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
CAPN3-204ENST00000356316 CASP8AP2Q9UKL3 1982 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 UBE2Q2LH0YL09 131 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 MYO1BO43795 1136 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 TRPA1O75762 1119 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 SASH1O94885 1247 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 DGKZQ13574 1117 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 C15orf52Q6ZUT6 534 aaKnown RBP13.45□□□□□ -0.26
CAPN3-204ENST00000356316 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-204ENST00000356316 CSRNP1Q96S65 589 aa13.45□□□□□ -0.26
CAPN3-204ENST00000356316 SNAP23O00161 211 aa13.44□□□□□ -0.26
CAPN3-204ENST00000356316 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
CAPN3-204ENST00000356316 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
CAPN3-204ENST00000356316 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
CAPN3-204ENST00000356316 PAPPA2Q9BXP8 1791 aa13.43□□□□□ -0.26
CAPN3-204ENST00000356316 E9PSI1 815 aa13.43□□□□□ -0.26
CAPN3-204ENST00000356316 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-204ENST00000356316 IL1R1P14778 569 aa13.43□□□□□ -0.26
CAPN3-204ENST00000356316 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPN3-204ENST00000356316 MOB2Q70IA6 237 aa13.43□□□□□ -0.26
CAPN3-204ENST00000356316 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
CAPN3-204ENST00000356316 FKBP1AP62942 108 aaKnown RBP13.42□□□□□ -0.26
CAPN3-204ENST00000356316 PRKG1Q13976 671 aa13.42□□□□□ -0.26
CAPN3-204ENST00000356316 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
CAPN3-204ENST00000356316 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
CAPN3-204ENST00000356316 PTPRCP08575 1304 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 NBPF7P0C2Y1 421 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-204ENST00000356316 HIBADHP31937 336 aaKnown RBP13.41□□□□□ -0.26
CAPN3-204ENST00000356316 VPS37DQ86XT2 251 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 MRPL50Q8N5N7 158 aaKnown RBP13.41□□□□□ -0.26
CAPN3-204ENST00000356316 MTMR14Q8NCE2 650 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
CAPN3-204ENST00000356316 ZNF646O15015 1829 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-204ENST00000356316 ZNF521Q96K83 1311 aa13.4□□□□□ -0.26
CAPN3-204ENST00000356316 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-204ENST00000356316 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-204ENST00000356316 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
CAPN3-204ENST00000356316 CFAP100Q494V2 611 aa13.4□□□□□ -0.26
CAPN3-204ENST00000356316 CERS5Q8N5B7 392 aa13.4□□□□□ -0.26
CAPN3-204ENST00000356316 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
CAPN3-204ENST00000356316 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 GYG1P46976 350 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 SREBF2Q12772 1141 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
CAPN3-204ENST00000356316 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 SLC10A4Q96EP9 437 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-204ENST00000356316 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
CAPN3-204ENST00000356316 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-204ENST00000356316 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
CAPN3-204ENST00000356316 PPP2R3BQ9Y5P8 575 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 UTYO14607 1347 aa13.39□□□□□ -0.27
CAPN3-204ENST00000356316 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 TM4SF4P48230 202 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 METTL24Q5JXM2 366 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 PRMT6Q96LA8 375 aaPredicted RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 PUS3Q9BZE2 481 aaKnown RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
CAPN3-204ENST00000356316 RIPOR2Q9Y4F9 1068 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 FAM205AQ6ZU69 1335 aa13.38□□□□□ -0.27
CAPN3-204ENST00000356316 ECM29Q5VYK3 1845 aa13.37□□□□□ -0.27
CAPN3-204ENST00000356316 CLRN2A0PK11 232 aa13.37□□□□□ -0.27
CAPN3-204ENST00000356316 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
CAPN3-204ENST00000356316 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
CAPN3-204ENST00000356316 MLLT1Q03111 559 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-204ENST00000356316 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
CAPN3-204ENST00000356316 PDE8BO95263 885 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 TBC1D8O95759 1140 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 INHBEP58166 350 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 TNFAIP1Q13829 316 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
CAPN3-204ENST00000356316 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
CAPN3-204ENST00000356316 UNCXA6NJT0 531 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
CAPN3-204ENST00000356316 RASA3Q14644 834 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 LRRC24Q50LG9 513 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
CAPN3-204ENST00000356316 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 USP44Q9H0E7 712 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
CAPN3-204ENST00000356316 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-204ENST00000356316 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
CAPN3-204ENST00000356316 TNNI2P48788 182 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 RGS19P49795 217 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms