RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 UBE4AQ14139 1066 aa21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 ZNF804AQ7Z570 1209 aa21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 PITPNM2Q9BZ72 1349 aa21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 LBX1P52954 281 aa21.03■□□□□ 0.96
PDLIM7-201ENST00000355572 PTPN12Q05209 780 aaKnown RBP21.03■□□□□ 0.96
PDLIM7-201ENST00000355572 HHIPL1Q96JK4 782 aa21.03■□□□□ 0.96
PDLIM7-201ENST00000355572 TSKSQ9UJT2 592 aa21.03■□□□□ 0.96
PDLIM7-201ENST00000355572 IQSEC3Q9UPP2 1182 aaPredicted RBP21.03■□□□□ 0.96
PDLIM7-201ENST00000355572 ECE1P42892 770 aa21.02■□□□□ 0.96
PDLIM7-201ENST00000355572 HNRNPUQ00839 825 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDLIM7-201ENST00000355572 ATG9AQ7Z3C6 839 aa21.02■□□□□ 0.96
PDLIM7-201ENST00000355572 FAM205AQ6ZU69 1335 aa21.02■□□□□ 0.95
PDLIM7-201ENST00000355572 MROH5Q6ZUA9 1318 aa21.02■□□□□ 0.95
PDLIM7-201ENST00000355572 CASP8AP2Q9UKL3 1982 aa21.01■□□□□ 0.95
PDLIM7-201ENST00000355572 METTL24Q5JXM2 366 aa21.01■□□□□ 0.95
PDLIM7-201ENST00000355572 LRRFIP2Q9Y608 721 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-201ENST00000355572 SSC5DA1L4H1 1573 aa21.01■□□□□ 0.95
PDLIM7-201ENST00000355572 PDE8BO95263 885 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 TRIM27P14373 513 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 FGFR2P21802 821 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 FBXO33Q7Z6M2 555 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 OGFOD1Q8N543 542 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 API5Q9BZZ5 524 aaKnown RBP21■□□□□ 0.95
PDLIM7-201ENST00000355572 FZD1Q9UP38 647 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
PDLIM7-201ENST00000355572 COL1A1P02452 1464 aaPredicted RBP21■□□□□ 0.95
PDLIM7-201ENST00000355572 AKAP11Q9UKA4 1901 aa21■□□□□ 0.95
PDLIM7-201ENST00000355572 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 HIBADHP31937 336 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 CTCFP49711 727 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 RGMBQ6NW40 437 aa20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 TNS4Q8IZW8 715 aa20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 C2orf69Q8N8R5 385 aa20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 OTOFQ9HC10 1997 aa20.99■□□□□ 0.95
PDLIM7-201ENST00000355572 EYA2O00167 538 aa20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 BCAMP50895 628 aa20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 MAP2K1Q02750 393 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 CFAP100Q494V2 611 aa20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 INTS3Q68E01 1043 aaKnown RBP20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 AIDAQ96BJ3 306 aa20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 PRMT6Q96LA8 375 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-201ENST00000355572 MAP2K2P36507 400 aa20.97■□□□□ 0.95
PDLIM7-201ENST00000355572 FKBP1AP62942 108 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-201ENST00000355572 SIL1Q9H173 461 aa20.97■□□□□ 0.95
PDLIM7-201ENST00000355572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-201ENST00000355572 KIF16BQ96L93 1317 aa20.97■□□□□ 0.95
PDLIM7-201ENST00000355572 CLRN2A0PK11 232 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 MFSD14BQ5SR56 506 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 MTMR14Q8NCE2 650 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 ARHGAP45Q92619 1136 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 CLUAP1Q96AJ1 413 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 PRDM10Q9NQV6 1147 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 HDAC9Q9UKV0 1011 aa20.96■□□□□ 0.95
PDLIM7-201ENST00000355572 SPDYE2BA6NHP3 402 aa20.95■□□□□ 0.94
PDLIM7-201ENST00000355572 UBE2Q2LH0YL09 131 aa20.95■□□□□ 0.94
PDLIM7-201ENST00000355572 SLC10A3P09131 477 aa20.95■□□□□ 0.94
PDLIM7-201ENST00000355572 SPDYE6P0CI01 402 aa20.95■□□□□ 0.94
PDLIM7-201ENST00000355572 RASAL3Q86YV0 1011 aa20.95■□□□□ 0.94
PDLIM7-201ENST00000355572 ZNF157P51786 506 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-201ENST00000355572 KIF23Q02241 960 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-201ENST00000355572 CHAF1AQ13111 956 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-201ENST00000355572 DLGAP5Q15398 846 aa20.94■□□□□ 0.94
PDLIM7-201ENST00000355572 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-201ENST00000355572 LAMB1P07942 1786 aa20.93■□□□□ 0.94
PDLIM7-201ENST00000355572 PRKG1Q13976 671 aa20.93■□□□□ 0.94
PDLIM7-201ENST00000355572 CDAN1Q8IWY9 1227 aa20.93■□□□□ 0.94
PDLIM7-201ENST00000355572 CAPN15O75808 1086 aa20.92■□□□□ 0.94
PDLIM7-201ENST00000355572 NOGQ13253 232 aa20.92■□□□□ 0.94
PDLIM7-201ENST00000355572 PUM3Q15397 648 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-201ENST00000355572 ATF7IPQ6VMQ6 1270 aa20.92■□□□□ 0.94
PDLIM7-201ENST00000355572 TTF2Q9UNY4 1162 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-201ENST00000355572 APOBEC3FQ8IUX4 373 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-201ENST00000355572 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
PDLIM7-201ENST00000355572 ADORA1P30542 326 aa20.9■□□□□ 0.94
PDLIM7-201ENST00000355572 MMP14P50281 582 aa20.9■□□□□ 0.94
PDLIM7-201ENST00000355572 DEFB129Q9H1M3 183 aa20.9■□□□□ 0.94
PDLIM7-201ENST00000355572 TDRD3Q9H7E2 651 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-201ENST00000355572 CIAO1O76071 339 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 RLBP1P12271 317 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 RBM5P52756 815 aaKnown RBP eCLIP20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 FKBP1BP68106 108 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 CSRNP1Q96S65 589 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 VEZTQ9HBM0 779 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
PDLIM7-201ENST00000355572 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 PNMA6EA0A0J9YXQ4 647 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 IFIT1P09914 478 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 CRKP46108 304 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 SPDYE2Q495Y8 402 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 NBPF12Q5TAG4 269 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 VPS37DQ86XT2 251 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 LPIN2Q92539 896 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 CCDC102AQ96A19 550 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 ZNF70Q9UC06 446 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 MYH2Q9UKX2 1941 aa20.88■□□□□ 0.93
PDLIM7-201ENST00000355572 PHKA1P46020 1223 aa20.87■□□□□ 0.93
PDLIM7-201ENST00000355572 MTX1Q13505 466 aa20.87■□□□□ 0.93
PDLIM7-201ENST00000355572 TTLL12Q14166 644 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-201ENST00000355572 ATP2B3Q16720 1220 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms