RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MYBL2P10244 700 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 AFAP1L1Q8TED9 768 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 RPS6KL1Q9Y6S9 549 aa12.26□□□□□ -0.45
CAPN3-203ENST00000349748 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 GRIK3Q13003 919 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 PREPLQ4J6C6 727 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-203ENST00000349748 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 FAM135BQ49AJ0 1406 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-203ENST00000349748 NRDCO43847 1150 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 RTN2O75298 545 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 SNX1Q13596 522 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-203ENST00000349748 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 KIF9Q9HAQ2 790 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 SLIT1O75093 1534 aa12.25□□□□□ -0.45
CAPN3-203ENST00000349748 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CEBPZQ03701 1054 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 OTUD6BQ8N6M0 293 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 PARD3BQ8TEW8 1205 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 RIN2Q8WYP3 895 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 OSBPL3Q9H4L5 887 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 SAMM50Q9Y512 469 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CHUKO15111 745 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 RHOXF2BP0C7M4 288 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 PEX19P40855 299 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 KCNJ6P48051 423 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 DDR1Q08345 913 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CRYMQ14894 314 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 HNRNPLLQ8WVV9 542 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 IL17RAQ96F46 866 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 RHOXF2Q9BQY4 288 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 TFRCP02786 760 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 GCKP35557 465 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 RPAP2Q8IXW5 612 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 MEIS3Q99687 375 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
CAPN3-203ENST00000349748 CPSF2Q9P2I0 782 aaKnown RBP12.24□□□□□ -0.45
CAPN3-203ENST00000349748 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 VSNL1P62760 191 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 PSME1Q06323 249 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 CCDC26Q8TAB7 109 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 CENPHQ9H3R5 247 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 CLSTN1O94985 981 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 ME3Q16798 604 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 CEP57Q86XR8 500 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
CAPN3-203ENST00000349748 KAT14Q9H8E8 782 aa12.23□□□□□ -0.45
CAPN3-203ENST00000349748 CCP110O43303 1012 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 IPO7O95373 1038 aaKnown RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 FNTAP49354 379 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 PSMD2Q13200 908 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 BAG1Q99933 345 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 IRX2Q9BZI1 471 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 WASLO00401 505 aaPredicted RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 CCT2P78371 535 aaKnown RBP12.22□□□□□ -0.45
CAPN3-203ENST00000349748 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 IGSF22Q8N9C0 903 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 ZBTB10Q96DT7 871 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
CAPN3-203ENST00000349748 ERLIN1O75477 346 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 SYF2O95926 243 aaKnown RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 USP5P45974 858 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 NAA25Q14CX7 972 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 ARMC2Q8NEN0 867 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 SPATS2LQ9NUQ6 558 aaKnown RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 SH3GL3Q99963 347 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 ANO10Q9NW15 660 aa12.21□□□□□ -0.45
CAPN3-203ENST00000349748 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.21□□□□□ -0.45
CAPN3-203ENST00000349748 CTAGE5O15320 804 aa12.21□□□□□ -0.46
CAPN3-203ENST00000349748 PRPF6O94906 941 aaKnown RBP12.21□□□□□ -0.46
CAPN3-203ENST00000349748 MRPL12P52815 198 aaKnown RBP12.21□□□□□ -0.46
CAPN3-203ENST00000349748 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms