RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
COL6A3-202ENST00000347401 APBB1IPQ7Z5R6 666 aaPredicted RBP14.97□□□□□ -0.01
COL6A3-202ENST00000347401 INSRP06213 1382 aa14.97□□□□□ -0.01
COL6A3-202ENST00000347401 POLR3DP05423 398 aaPredicted RBP14.96□□□□□ -0.01
COL6A3-202ENST00000347401 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 VPS52Q8N1B4 723 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 INF2Q27J81 1249 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 CEP85LQ5SZL2 805 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 GIMAP6Q6P9H5 292 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 BICD1Q96G01 975 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 ARHGAP6O43182 974 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 EVCP57679 992 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 PAK2Q13177 524 aa14.96□□□□□ -0.01
COL6A3-202ENST00000347401 SPTLC2O15270 562 aa14.96□□□□□ -0.02
COL6A3-202ENST00000347401 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.02
COL6A3-202ENST00000347401 PPP1R7Q15435 360 aa14.96□□□□□ -0.02
COL6A3-202ENST00000347401 ESR2Q92731 530 aa14.96□□□□□ -0.02
COL6A3-202ENST00000347401 ATP2A3Q93084 1043 aa14.96□□□□□ -0.02
COL6A3-202ENST00000347401 GCC2Q8IWJ2 1684 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC144CPQ8IYA2 1237 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 DRC1Q96MC2 740 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
COL6A3-202ENST00000347401 GLT8D2Q9H1C3 349 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 ZBTB43O43298 467 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 AP1ARQ63HQ0 302 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 IL1RAPL2Q9NP60 686 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 CETN3O15182 167 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 APBA1Q02410 837 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 SELENOSQ9BQE4 189 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 MGEA5O60502 916 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 MYL5Q02045 173 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 HAUS8Q9BT25 410 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 RAB17Q9H0T7 212 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 KAT14Q9H8E8 782 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 B4DLN1 442 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 I3L4J1 428 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 MRPL12P52815 198 aaKnown RBP14.95□□□□□ -0.02
COL6A3-202ENST00000347401 THEMISQ8N1K5 641 aaPredicted RBP14.95□□□□□ -0.02
COL6A3-202ENST00000347401 IQUBQ8NA54 791 aa14.95□□□□□ -0.02
COL6A3-202ENST00000347401 GOLGA4Q13439 2230 aaKnown RBP14.94□□□□□ -0.02
COL6A3-202ENST00000347401 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 UQCRFS1P1P0C7P4 283 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 UBXN1Q04323 297 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 RILPL1Q5EBL4 403 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 TMTC1Q8IUR5 882 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 TBC1D31Q96DN5 1066 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 GBP5Q96PP8 586 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 TRIM75PA6NK02 468 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 BIN1O00499 593 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 RLBP1P12271 317 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 PRIM1P49642 420 aaKnown RBP14.94□□□□□ -0.02
COL6A3-202ENST00000347401 DNA2P51530 1060 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 AOPEPQ8N6M6 819 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 LRCH2Q5VUJ6 765 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 GOLGA5Q8TBA6 731 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 NCAPGQ9BPX3 1015 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 SEPT10Q9P0V9 454 aa14.94□□□□□ -0.02
COL6A3-202ENST00000347401 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC63Q8NA47 563 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC51Q96ER9 411 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 BOLA2Q9H3K6 86 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 AOX1Q06278 1338 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 MYL6BP14649 208 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 GNA11P29992 359 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 MAIP1Q8WWC4 291 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 WTAPQ15007 396 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CRACR2BQ8N4Y2 399 aaPredicted RBP14.93□□□□□ -0.02
COL6A3-202ENST00000347401 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 MINDY4BA8MYZ0 360 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CFAP70Q5T0N1 1121 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 RRAGBQ5VZM2 374 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC82Q8N4S0 544 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
COL6A3-202ENST00000347401 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 FAM160A1Q05DH4 1040 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 CFAP221Q4G0U5 840 aa14.93□□□□□ -0.02
COL6A3-202ENST00000347401 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 NOX5Q96PH1 765 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 SPATS2LQ9NUQ6 558 aaKnown RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 DACT1Q9NYF0 836 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 CDC5LQ99459 802 aaKnown RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 RTN1Q16799 776 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 P3H4Q92791 437 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 ABCF2Q9UG63 623 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 IDEP14735 1019 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC122Q5T0U0 273 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 HIP1RO75146 1068 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 SDCCAG8Q86SQ7 713 aaPredicted RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 UBLCP1Q8WVY7 318 aaPredicted RBP14.92□□□□□ -0.02
COL6A3-202ENST00000347401 SERPINA10Q9UK55 444 aa14.92□□□□□ -0.02
COL6A3-202ENST00000347401 RBM5P52756 815 aaKnown RBP eCLIP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms