RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PRC1O43663 620 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 CHST3Q7LGC8 479 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 KCNG4Q8TDN1 519 aa17.65■□□□□ 0.42
SRPK1-201ENST00000346162 WTAPQ15007 396 aa17.64■□□□□ 0.42
SRPK1-201ENST00000346162 BCCIPQ9P287 314 aaKnown RBP eCLIP17.64■□□□□ 0.42
SRPK1-201ENST00000346162 PUF60Q9UHX1 559 aaKnown RBP17.64■□□□□ 0.42
SRPK1-201ENST00000346162 RRP15Q9Y3B9 282 aaKnown RBP17.64■□□□□ 0.42
SRPK1-201ENST00000346162 ENOX2Q16206 610 aaKnown RBP17.64■□□□□ 0.41
SRPK1-201ENST00000346162 CEP112Q8N8E3 955 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 USP44Q9H0E7 712 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 IQSEC3Q9UPP2 1182 aaPredicted RBP17.64■□□□□ 0.41
SRPK1-201ENST00000346162 GOLGA6L10A0A0M3HER8 536 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 UBASH3AP57075 661 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 TIMM10P62072 90 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.64■□□□□ 0.41
SRPK1-201ENST00000346162 GOLGA5Q8TBA6 731 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.41
SRPK1-201ENST00000346162 MRPS27Q92552 414 aaKnown RBP17.64■□□□□ 0.41
SRPK1-201ENST00000346162 METP08581 1390 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 TSPY2A6NKD2 308 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 RHOXF2BP0C7M4 288 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 SYKP43405 635 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 APOBRQ0VD83 1088 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 FMNL3Q8IVF7 1028 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 RHOXF2Q9BQY4 288 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 SNX14Q9Y5W7 946 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 ZEB2O60315 1214 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 CCDC172P0C7W6 258 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 PYCARDQ9ULZ3 195 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 KRT23Q9C075 422 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 DBNDD2Q9BQY9 259 aa17.63■□□□□ 0.41
SRPK1-201ENST00000346162 AATKQ6ZMQ8 1374 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
SRPK1-201ENST00000346162 CYP7A1P22680 504 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 LRMPQ12912 555 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 CCDC121Q6ZUS5 278 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 TUBBP07437 444 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 PAFAH1B1P43034 410 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 PDE4BQ07343 736 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 TNNI3KQ59H18 835 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 TMTC2Q8N394 836 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 GPT2Q8TD30 523 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 CNNM2Q9H8M5 875 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 SLC4A4Q9Y6R1 1079 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 FPGT-TNNI3KV9GXZ4 949 aa17.62■□□□□ 0.41
SRPK1-201ENST00000346162 KIF5BP33176 963 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 FAM76AQ8TAV0 307 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 AFAP1L1Q8TED9 768 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 FAM227BQ96M60 508 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 ZNF75DP51815 510 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 DZIP3Q86Y13 1208 aaKnown RBP17.61■□□□□ 0.41
SRPK1-201ENST00000346162 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 HELBQ8NG08 1087 aaPredicted RBP17.61■□□□□ 0.41
SRPK1-201ENST00000346162 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
SRPK1-201ENST00000346162 LDHCP07864 332 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 IBTKQ9P2D0 1353 aaPredicted RBP17.61■□□□□ 0.41
SRPK1-201ENST00000346162 PCDH11XQ9BZA7 1347 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 PCDH11YQ9BZA8 1340 aa17.61■□□□□ 0.41
SRPK1-201ENST00000346162 EYA2O00167 538 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 ESR2Q92731 530 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
SRPK1-201ENST00000346162 ACSBG1Q96GR2 724 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 HSF2BPO75031 334 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
SRPK1-201ENST00000346162 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
SRPK1-201ENST00000346162 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
SRPK1-201ENST00000346162 MYO1CO00159 1063 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 RTN1Q16799 776 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 ZFYVE27Q5T4F4 411 aa17.6■□□□□ 0.41
SRPK1-201ENST00000346162 SLC27A2O14975 620 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 HSPA2P54652 639 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 GCKRQ14397 625 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 MARCKSP29966 332 aaPredicted RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 CRACR2BQ8N4Y2 399 aaPredicted RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 KIAA1524Q8TCG1 905 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 BAG3O95817 575 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 ZNF76P36508 570 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 AP1ARQ63HQ0 302 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 KANK3Q6NY19 840 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 MAATS1Q7Z4T9 603 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 UTP14AQ9BVJ6 771 aaKnown RBP17.59■□□□□ 0.41
SRPK1-201ENST00000346162 RABEP2Q9H5N1 569 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SRPK1-201ENST00000346162 KCNQ3O43525 872 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms