RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 USP17L3A6NCW0 530 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 USP17L4A6NCW7 530 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 WTIPA6NIX2 430 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 RAD17O75943 681 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 SASH1O94885 1247 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 TIE1P35590 1138 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 CXCL9Q07325 125 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 USP17L1Q7RTZ2 530 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 FBXO33Q7Z6M2 555 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 TXNRD3Q86VQ6 643 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 CLASRPQ8N2M8 674 aaKnown RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 FAM84BQ96KN1 310 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 GPBP1L1Q9HC44 474 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 BMP2KQ9NSY1 1161 aaPredicted RBP14.56□□□□□ -0.08
SNCA-202ENST00000345009 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
SNCA-202ENST00000345009 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
SNCA-202ENST00000345009 A0A1B0GUL7 405 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 IQCA1LA6NCM1 817 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 APBB1O00213 710 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 GYG1P46976 350 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 TIMM10P62072 90 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 HDAC1Q13547 482 aaPredicted RBP14.55□□□□□ -0.08
SNCA-202ENST00000345009 TTLL5Q6EMB2 1281 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 LTBP1Q14766 1721 aa14.55□□□□□ -0.08
SNCA-202ENST00000345009 IL1R1P14778 569 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 RPS12P25398 132 aaKnown RBP14.54□□□□□ -0.08
SNCA-202ENST00000345009 KLRK1P26718 216 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 LMOD1P29536 600 aaPredicted RBP14.54□□□□□ -0.08
SNCA-202ENST00000345009 BCAMP50895 628 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 TNNI3KQ59H18 835 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 STRIP1Q5VSL9 837 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 ASTLQ6HA08 431 aaPredicted RBP14.54□□□□□ -0.08
SNCA-202ENST00000345009 RHPN1Q8TCX5 695 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 FBXW7Q969H0 707 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 GCC1Q96CN9 775 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 TMEM106CQ9BVX2 250 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 LRRCC1Q9C099 1032 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 FPGT-TNNI3KV9GXZ4 949 aa14.54□□□□□ -0.08
SNCA-202ENST00000345009 MYO3BQ8WXR4 1341 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 ZNF541Q9H0D2 1346 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 IRS2Q9Y4H2 1338 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 YDJCA8MPS7 323 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 SEMA3EO15041 775 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 DDNO94850 711 aaPredicted RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 VIL1P09327 827 aaKnown RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 MMP14P50281 582 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 TDRD7Q8NHU6 1098 aaKnown RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
SNCA-202ENST00000345009 XAGE2Q96GT9 111 aa14.53□□□□□ -0.08
SNCA-202ENST00000345009 PSMD14O00487 310 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 IFIT2P09913 472 aaKnown RBP14.52□□□□□ -0.09
SNCA-202ENST00000345009 GTF2IP78347 998 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 AACSQ86V21 672 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 OGFOD1Q8N543 542 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 AGBL3Q8NEM8 1001 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 TBC1D22AQ8WUA7 517 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 DPF2Q92785 391 aa14.52□□□□□ -0.09
SNCA-202ENST00000345009 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.09
SNCA-202ENST00000345009 TTLL13PA6NNM8 815 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 H7C1D1 291 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 ECM2O94769 699 aaPredicted RBP14.51□□□□□ -0.09
SNCA-202ENST00000345009 UQCRFS1P1P0C7P4 283 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 CCDC102BQ68D86 513 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 RSBN1LQ6PCB5 846 aaPredicted RBP14.51□□□□□ -0.09
SNCA-202ENST00000345009 C16orf71Q8IYS4 520 aaPredicted RBP14.51□□□□□ -0.09
SNCA-202ENST00000345009 ZNF784Q8NCA9 323 aaPredicted RBP14.51□□□□□ -0.09
SNCA-202ENST00000345009 IL1RAPL2Q9NP60 686 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 KCNQ5Q9NR82 932 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 HACL1Q9UJ83 578 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 DENND2AQ9ULE3 1009 aa14.51□□□□□ -0.09
SNCA-202ENST00000345009 FAM205AQ6ZU69 1335 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 ADORA1P30542 326 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 GMPSP49915 693 aaPredicted RBP14.5□□□□□ -0.09
SNCA-202ENST00000345009 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
SNCA-202ENST00000345009 TTC39AQ5SRH9 613 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 WDR66Q8TBY9 1149 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 RRAGCQ9HB90 399 aa14.5□□□□□ -0.09
SNCA-202ENST00000345009 PHKA1P46020 1223 aa14.49□□□□□ -0.09
SNCA-202ENST00000345009 CHAF1AQ13111 956 aaPredicted RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 DACT2Q5SW24 774 aa14.49□□□□□ -0.09
SNCA-202ENST00000345009 PNMA8AQ86V59 439 aaPredicted RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 EAF2Q96CJ1 260 aaPredicted RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 GPATCH3Q96I76 525 aa14.49□□□□□ -0.09
SNCA-202ENST00000345009 CCDC8Q9H0W5 538 aaPredicted RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 CNOT7Q9UIV1 285 aaKnown RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 HDAC9Q9UKV0 1011 aa14.49□□□□□ -0.09
SNCA-202ENST00000345009 IQSEC3Q9UPP2 1182 aaPredicted RBP14.49□□□□□ -0.09
SNCA-202ENST00000345009 COL4A5P29400 1685 aa14.49□□□□□ -0.09
SNCA-202ENST00000345009 USP17L8P0C7I0 530 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 MFSD14BQ5SR56 506 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 ANKRD45Q5TZF3 282 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 GPRC5DQ9NZD1 345 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms