RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 TNS4Q8IZW8 715 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 KLHDC4Q8TBB5 520 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 GBA2Q9HCG7 927 aaPredicted RBP18.13■□□□□ 0.49
HMGN3-202ENST00000344726 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 JAG2Q9Y219 1238 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 KIF16BQ96L93 1317 aa18.13■□□□□ 0.49
HMGN3-202ENST00000344726 LBX1P52954 281 aa18.12■□□□□ 0.49
HMGN3-202ENST00000344726 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
HMGN3-202ENST00000344726 AIDAQ96BJ3 306 aa18.12■□□□□ 0.49
HMGN3-202ENST00000344726 ZBED3Q96IU2 234 aaPredicted RBP18.12■□□□□ 0.49
HMGN3-202ENST00000344726 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
HMGN3-202ENST00000344726 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
HMGN3-202ENST00000344726 FAM155AB1AL88 458 aaPredicted RBP18.11■□□□□ 0.49
HMGN3-202ENST00000344726 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
HMGN3-202ENST00000344726 CTCFP49711 727 aaPredicted RBP18.11■□□□□ 0.49
HMGN3-202ENST00000344726 ARHGAP45Q92619 1136 aa18.11■□□□□ 0.49
HMGN3-202ENST00000344726 MAP2K2P36507 400 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 GYG1P46976 350 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 ZNF804AQ7Z570 1209 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 VGLL2Q8N8G2 317 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 MEIS3Q99687 375 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 PRDM10Q9NQV6 1147 aa18.1■□□□□ 0.49
HMGN3-202ENST00000344726 PAPPA2Q9BXP8 1791 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 ARAP2Q8WZ64 1704 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 AOX1Q06278 1338 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 ZBED9Q6R2W3 1325 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 MROH5Q6ZUA9 1318 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
HMGN3-202ENST00000344726 TRIM27P14373 513 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 UBE4AQ14139 1066 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 INTS3Q68E01 1043 aaKnown RBP18.09■□□□□ 0.49
HMGN3-202ENST00000344726 MOB2Q70IA6 237 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 FAM84BQ96KN1 310 aaPredicted RBP18.09■□□□□ 0.49
HMGN3-202ENST00000344726 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
HMGN3-202ENST00000344726 ECM29Q5VYK3 1845 aa18.08■□□□□ 0.48
HMGN3-202ENST00000344726 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
HMGN3-202ENST00000344726 RGMBQ6NW40 437 aa18.08■□□□□ 0.48
HMGN3-202ENST00000344726 C2orf69Q8N8R5 385 aa18.08■□□□□ 0.48
HMGN3-202ENST00000344726 LRRFIP2Q9Y608 721 aaKnown RBP18.08■□□□□ 0.48
HMGN3-202ENST00000344726 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
HMGN3-202ENST00000344726 METTL24Q5JXM2 366 aa18.07■□□□□ 0.48
HMGN3-202ENST00000344726 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
HMGN3-202ENST00000344726 TDRD7Q8NHU6 1098 aaKnown RBP18.07■□□□□ 0.48
HMGN3-202ENST00000344726 FRAT1Q92837 279 aaPredicted RBP18.07■□□□□ 0.48
HMGN3-202ENST00000344726 MYH13Q9UKX3 1938 aa18.06■□□□□ 0.48
HMGN3-202ENST00000344726 FAM205AQ6ZU69 1335 aa18.06■□□□□ 0.48
HMGN3-202ENST00000344726 IPO8O15397 1037 aaKnown RBP18.05■□□□□ 0.48
HMGN3-202ENST00000344726 PDE8BO95263 885 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 SLC10A3P09131 477 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
HMGN3-202ENST00000344726 ZNF157P51786 506 aaPredicted RBP18.05■□□□□ 0.48
HMGN3-202ENST00000344726 FKBP1AP62942 108 aaKnown RBP18.05■□□□□ 0.48
HMGN3-202ENST00000344726 NOGQ13253 232 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 ATG9AQ7Z3C6 839 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 HDAC9Q9UKV0 1011 aa18.05■□□□□ 0.48
HMGN3-202ENST00000344726 EYA2O00167 538 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 MMP14P50281 582 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 GRIK5Q16478 980 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 FBXO33Q7Z6M2 555 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 MTMR14Q8NCE2 650 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 IQSEC3Q9UPP2 1182 aaPredicted RBP18.04■□□□□ 0.48
HMGN3-202ENST00000344726 SSC5DA1L4H1 1573 aa18.04■□□□□ 0.48
HMGN3-202ENST00000344726 FGFR2P21802 821 aa18.03■□□□□ 0.48
HMGN3-202ENST00000344726 DLGAP5Q15398 846 aa18.03■□□□□ 0.48
HMGN3-202ENST00000344726 CFAP100Q494V2 611 aa18.03■□□□□ 0.48
HMGN3-202ENST00000344726 RASAL3Q86YV0 1011 aa18.03■□□□□ 0.48
HMGN3-202ENST00000344726 PRMT6Q96LA8 375 aaPredicted RBP18.03■□□□□ 0.48
HMGN3-202ENST00000344726 SIL1Q9H173 461 aa18.03■□□□□ 0.48
HMGN3-202ENST00000344726 PA2G4Q9UQ80 394 aaKnown RBP18.03■□□□□ 0.48
HMGN3-202ENST00000344726 SPDYE2BA6NHP3 402 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 UBE2Q2LH0YL09 131 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 SPDYE6P0CI01 402 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 FKBP1BP68106 108 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.48
HMGN3-202ENST00000344726 MFSD14BQ5SR56 506 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 FZD1Q9UP38 647 aa18.02■□□□□ 0.48
HMGN3-202ENST00000344726 CLRN2A0PK11 232 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 GNAI3P08754 354 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 BCAMP50895 628 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 APOBEC3FQ8IUX4 373 aaKnown RBP18.01■□□□□ 0.47
HMGN3-202ENST00000344726 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 CCDC102AQ96A19 550 aa18.01■□□□□ 0.47
HMGN3-202ENST00000344726 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
HMGN3-202ENST00000344726 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
HMGN3-202ENST00000344726 HDAC5Q9UQL6 1122 aa18■□□□□ 0.47
HMGN3-202ENST00000344726 CIAO1O76071 339 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
HMGN3-202ENST00000344726 PRKG1Q13976 671 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 CSRNP1Q96S65 589 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 DEFB129Q9H1M3 183 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 COPRSQ9NQ92 184 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 FBXO3Q9UK99 471 aa17.99■□□□□ 0.47
HMGN3-202ENST00000344726 TTF2Q9UNY4 1162 aaKnown RBP17.99■□□□□ 0.47
HMGN3-202ENST00000344726 RLBP1P12271 317 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms