RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SNAP23O00161 211 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 FAM84BQ96KN1 310 aaPredicted RBP9.81□□□□□ -0.84
HMGCR-202ENST00000343975 POLLQ9UGP5 575 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 IGSF3O75054 1194 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 REC8O95072 547 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 CYP7A1P22680 504 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 CLEC11AQ9Y240 323 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 KDM2BQ8NHM5 1336 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 RASSF7Q02833 373 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 OLFM4Q6UX06 510 aa9.81□□□□□ -0.84
HMGCR-202ENST00000343975 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.81□□□□□ -0.84
HMGCR-202ENST00000343975 TTF2Q9UNY4 1162 aaKnown RBP9.81□□□□□ -0.84
HMGCR-202ENST00000343975 DLGAP5Q15398 846 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 SLC9C2Q5TAH2 1124 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 STRIP1Q5VSL9 837 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 TMED8Q6PL24 325 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-202ENST00000343975 TEKT1Q969V4 418 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 IQCA1LA6NCM1 817 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 ZAP70P43403 619 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 TSHZ3Q63HK5 1081 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 USP5P45974 858 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
HMGCR-202ENST00000343975 C15orf52Q6ZUT6 534 aaKnown RBP9.8□□□□□ -0.84
HMGCR-202ENST00000343975 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 KIAA0825Q8IV33 1275 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 PLEKHM2Q8IWE5 1019 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 ZSCAN29Q8IWY8 852 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-202ENST00000343975 DAXXQ9UER7 740 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-202ENST00000343975 SUGT1Q9Y2Z0 365 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
HMGCR-202ENST00000343975 SLC3A2P08195 630 aaKnown RBP9.79□□□□□ -0.84
HMGCR-202ENST00000343975 TNNI2P48788 182 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 ZNF609O15014 1411 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 FGFR2P21802 821 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 RPS12P25398 132 aaKnown RBP9.79□□□□□ -0.84
HMGCR-202ENST00000343975 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 HAUS7Q99871 368 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 CRNKL1Q9BZJ0 848 aaKnown RBP9.79□□□□□ -0.84
HMGCR-202ENST00000343975 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 RASGRF1Q13972 1273 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 KBTBD3Q8NAB2 608 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 TLR7Q9NYK1 1049 aaKnown RBP9.79□□□□□ -0.84
HMGCR-202ENST00000343975 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
HMGCR-202ENST00000343975 MMP14P50281 582 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 MAGEB6Q8N7X4 407 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 TDRD7Q8NHU6 1098 aaKnown RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 RTFDC1Q9BY42 306 aaPredicted RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 TOMM22Q9NS69 142 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 FGD1P98174 961 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 ZNF512BQ96KM6 892 aaPredicted RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 RNF113AO15541 343 aaKnown RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 KCNA3P22001 575 aa9.78□□□□□ -0.84
HMGCR-202ENST00000343975 ARID4AP29374 1257 aaPredicted RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 OTUD7AQ8TE49 926 aaPredicted RBP9.78□□□□□ -0.84
HMGCR-202ENST00000343975 NF2P35240 595 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 TDO2P48775 406 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 TNFAIP1Q13829 316 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 VGLL2Q8N8G2 317 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 VEZTQ9HBM0 779 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.84
HMGCR-202ENST00000343975 MAGEB6P1A0A0J9YX57 407 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.85
HMGCR-202ENST00000343975 AGBL3Q8NEM8 1001 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 HLA-DOAP06340 250 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 ZKSCAN1P17029 563 aaPredicted RBP9.77□□□□□ -0.85
HMGCR-202ENST00000343975 GNAT2P19087 354 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 TRDNQ13061 729 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 CWC27Q6UX04 472 aaKnown RBP9.77□□□□□ -0.85
HMGCR-202ENST00000343975 TBC1D9Q6ZT07 1266 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 C7orf43Q8WVR3 580 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 ZNF287Q9HBT7 754 aa9.77□□□□□ -0.85
HMGCR-202ENST00000343975 NFKBIEO00221 500 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 IL1R1P14778 569 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 MCAMP43121 646 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
HMGCR-202ENST00000343975 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 APPBP2Q92624 585 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 HOOK2Q96ED9 719 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 COL24A1Q17RW2 1714 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 POLR3DP05423 398 aaPredicted RBP9.76□□□□□ -0.85
HMGCR-202ENST00000343975 ZC3H4Q9UPT8 1303 aaKnown RBP9.76□□□□□ -0.85
HMGCR-202ENST00000343975 SDSP20132 328 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 CXCL9Q07325 125 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 TEX11Q8IYF3 940 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 NAPBQ9H115 298 aa9.76□□□□□ -0.85
HMGCR-202ENST00000343975 TUBGCP6Q96RT7 1819 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 PSMD14O00487 310 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 KLRK1P26718 216 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 SCNN1DP51172 638 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
HMGCR-202ENST00000343975 CRACR2BQ8N4Y2 399 aaPredicted RBP9.75□□□□□ -0.85
HMGCR-202ENST00000343975 ZNF526Q8TF50 670 aaPredicted RBP9.75□□□□□ -0.85
HMGCR-202ENST00000343975 MYH3P11055 1940 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms