RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ALDH1L1O75891 902 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 HOXD10P28358 340 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 KCNQ4P56696 695 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 YDJCA8MPS7 323 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 PTCD1O75127 700 aaKnown RBP9.16□□□□□ -0.94
ZNF540-202ENST00000343599 GTF2A2P52657 109 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 HIRAP54198 1017 aaPredicted RBP9.16□□□□□ -0.94
ZNF540-202ENST00000343599 PPIL2Q13356 520 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 DGKZQ13574 1117 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 GGA1Q9UJY5 639 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 CELF2O95319 508 aaKnown RBP9.16□□□□□ -0.94
ZNF540-202ENST00000343599 IGHA2P01877 340 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 TPM2P07951 284 aa9.16□□□□□ -0.94
ZNF540-202ENST00000343599 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
ZNF540-202ENST00000343599 LRRC37A2A6NM11 1700 aa9.15□□□□□ -0.94
ZNF540-202ENST00000343599 KIF23Q02241 960 aaPredicted RBP9.15□□□□□ -0.94
ZNF540-202ENST00000343599 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
ZNF540-202ENST00000343599 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
ZNF540-202ENST00000343599 SOX12O15370 315 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 ECE2O60344 883 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 CANXP27824 592 aaKnown RBP9.15□□□□□ -0.95
ZNF540-202ENST00000343599 RPS8P62241 208 aaKnown RBP9.15□□□□□ -0.95
ZNF540-202ENST00000343599 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 NBPF11Q86T75 865 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 RLFQ13129 1914 aa9.15□□□□□ -0.95
ZNF540-202ENST00000343599 CXCL11O14625 94 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 TCERG1O14776 1098 aaKnown RBP9.14□□□□□ -0.95
ZNF540-202ENST00000343599 A1BGP04217 495 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 CASP7P55210 303 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 UBE4AQ14139 1066 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 IFNL1Q8IU54 200 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 WDR63Q8IWG1 891 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 FAM163AQ96GL9 167 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-202ENST00000343599 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 ZNF277Q9NRM2 450 aaPredicted RBP9.14□□□□□ -0.95
ZNF540-202ENST00000343599 SIPA1L1O43166 1804 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 HHIPL2Q6UWX4 724 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 SLAIN1Q8ND83 568 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 MYOZ2Q9NPC6 264 aa9.14□□□□□ -0.95
ZNF540-202ENST00000343599 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 IREB2P48200 963 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 HABP4Q5JVS0 413 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 L1TD1Q5T7N2 865 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 BICDL1Q6ZP65 573 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 BACH2Q9BYV9 841 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 MS4A1P11836 297 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 PPATQ06203 517 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 SMAP1Q8IYB5 467 aaPredicted RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 ANKRD13AQ8IZ07 590 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
ZNF540-202ENST00000343599 TNNI2P48788 182 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 HLFQ16534 295 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 LBX2Q6XYB7 198 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 MICALL2Q8IY33 904 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 OTUD5Q96G74 571 aa9.13□□□□□ -0.95
ZNF540-202ENST00000343599 SPDYE5A6NIY4 337 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 EPS15P42566 896 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 SPDYE2Q495Y8 402 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 MYH16Q9H6N6 1097 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 MROH5Q6ZUA9 1318 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 LOC102724159A0A0B4J2E5 919 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 HOXC6P09630 235 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 PWP2Q15269 919 aaKnown RBP9.12□□□□□ -0.95
ZNF540-202ENST00000343599 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
ZNF540-202ENST00000343599 PDE4AP27815 886 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 TMPOP42166 694 aaKnown RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 CCDC30Q5VVM6 783 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 CWC25Q9NXE8 425 aaPredicted RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 PSMD14O00487 310 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 NCLP19338 710 aaKnown RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 RABL6Q3YEC7 729 aaPredicted RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
ZNF540-202ENST00000343599 TDRD7Q8NHU6 1098 aaKnown RBP9.11□□□□□ -0.95
ZNF540-202ENST00000343599 CIAO1O76071 339 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 CETPP11597 493 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 SLC39A6Q13433 755 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 KRT26Q7Z3Y9 468 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 PHACTR3Q96KR7 559 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 CTSWP56202 376 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 HUNKP57058 714 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 ZNF512BQ96KM6 892 aaPredicted RBP9.1□□□□□ -0.95
ZNF540-202ENST00000343599 ZFYVE28Q9HCC9 887 aa9.1□□□□□ -0.95
ZNF540-202ENST00000343599 IRF6O14896 467 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 GPSM2P81274 684 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 CNGB1Q14028 1251 aaPredicted RBP9.09□□□□□ -0.95
ZNF540-202ENST00000343599 UTP14CQ5TAP6 766 aaKnown RBP9.09□□□□□ -0.95
ZNF540-202ENST00000343599 DCAF15Q66K64 600 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 BCL2L13Q9BXK5 485 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 STXBP5LQ9Y2K9 1186 aa9.09□□□□□ -0.95
ZNF540-202ENST00000343599 ENTPD3O75355 529 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms