RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 FOXO4P98177 505 aa12.91□□□□□ -0.34
TPM3-207ENST00000341372 DPY19L2Q6NUT2 758 aa12.91□□□□□ -0.34
TPM3-207ENST00000341372 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
TPM3-207ENST00000341372 TMX4Q9H1E5 349 aaPredicted RBP12.91□□□□□ -0.34
TPM3-207ENST00000341372 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
TPM3-207ENST00000341372 A0A1B0GUL6 1792 aa12.9□□□□□ -0.34
TPM3-207ENST00000341372 CCT4P50991 539 aaKnown RBP12.89□□□□□ -0.35
TPM3-207ENST00000341372 MPNDQ8N594 471 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
TPM3-207ENST00000341372 UCN2Q96RP3 112 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
TPM3-207ENST00000341372 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 AP1G2O75843 785 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 NBPF7P0C2Y1 421 aaPredicted RBP12.89□□□□□ -0.35
TPM3-207ENST00000341372 TCF3P15923 654 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 QPCTQ16769 361 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 EPHA10Q5JZY3 1008 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
TPM3-207ENST00000341372 ANKRD18AQ8IVF6 992 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
TPM3-207ENST00000341372 FZD9O00144 591 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 KIF3CO14782 793 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 GPR37L1O60883 481 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 BCAR3O75815 825 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 RABL6Q3YEC7 729 aaPredicted RBP12.88□□□□□ -0.35
TPM3-207ENST00000341372 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
TPM3-207ENST00000341372 ITGA6P23229 1130 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 GPSM2P81274 684 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
TPM3-207ENST00000341372 TFIP11Q9UBB9 837 aaKnown RBP12.88□□□□□ -0.35
TPM3-207ENST00000341372 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
TPM3-207ENST00000341372 TRIM27P14373 513 aa12.87□□□□□ -0.35
TPM3-207ENST00000341372 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
TPM3-207ENST00000341372 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
TPM3-207ENST00000341372 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
TPM3-207ENST00000341372 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
TPM3-207ENST00000341372 TRPC6Q9Y210 931 aa12.87□□□□□ -0.35
TPM3-207ENST00000341372 PPIP5K2O43314 1243 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 SCN4AP35499 1836 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 AOC3Q16853 763 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 POLLQ9UGP5 575 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
TPM3-207ENST00000341372 XDHP47989 1333 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
TPM3-207ENST00000341372 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
TPM3-207ENST00000341372 VAC14Q08AM6 782 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
TPM3-207ENST00000341372 DIXDC1Q155Q3 683 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
TPM3-207ENST00000341372 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
TPM3-207ENST00000341372 MINPP1Q9UNW1 487 aa12.85□□□□□ -0.35
TPM3-207ENST00000341372 PSME4Q14997 1843 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 SPATA32Q96LK8 384 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 EYA3Q99504 573 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 ALG2Q9H553 416 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 TNNQ9UQP3 1299 aa12.84□□□□□ -0.35
TPM3-207ENST00000341372 POTECB2RU33 542 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 EVI5O60447 810 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 ATP2B4P23634 1241 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 SREK1Q8WXA9 508 aaKnown RBP12.83□□□□□ -0.36
TPM3-207ENST00000341372 FRAT1Q92837 279 aaPredicted RBP12.83□□□□□ -0.36
TPM3-207ENST00000341372 GGA1Q9UJY5 639 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
TPM3-207ENST00000341372 UFL1O94874 794 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 WASHC4Q2M389 1173 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 GPC2Q8N158 579 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.36
TPM3-207ENST00000341372 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
TPM3-207ENST00000341372 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
TPM3-207ENST00000341372 PHLDB3Q6NSJ2 640 aa12.82□□□□□ -0.36
TPM3-207ENST00000341372 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
TPM3-207ENST00000341372 ZNF646O15015 1829 aaPredicted RBP12.82□□□□□ -0.36
TPM3-207ENST00000341372 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
TPM3-207ENST00000341372 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
TPM3-207ENST00000341372 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
TPM3-207ENST00000341372 MEIS3Q99687 375 aa12.81□□□□□ -0.36
TPM3-207ENST00000341372 ANKRD2Q9GZV1 360 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms