RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SAPCD2Q86UD0 394 aa16.65■□□□□ 0.26
SIRPB3P-201ENST00000340424 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
SIRPB3P-201ENST00000340424 EYA2O00167 538 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 BCAR3O75815 825 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 CIAO1O76071 339 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 PUM3Q15397 648 aaKnown RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 FAM205AQ6ZU69 1335 aa16.64■□□□□ 0.25
SIRPB3P-201ENST00000340424 THSD7BQ9C0I4 1608 aa16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 FAM84BQ96KN1 310 aaPredicted RBP16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 MEIS3Q99687 375 aa16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 MXD3Q9BW11 206 aa16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 ZNF408Q9H9D4 720 aa16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
SIRPB3P-201ENST00000340424 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 WNT10BO00744 389 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 HSPA1AP0DMV8 641 aaKnown RBP16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 HSPA1BP0DMV9 641 aaKnown RBP16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 C2orf69Q8N8R5 385 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 MTMR14Q8NCE2 650 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 KLHDC4Q8TBB5 520 aa16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
SIRPB3P-201ENST00000340424 GYG1P46976 350 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 MTX1Q13505 466 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 LPIN2Q92539 896 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 GBA2Q9HCG7 927 aaPredicted RBP16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 ARAP2Q8WZ64 1704 aa16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
SIRPB3P-201ENST00000340424 SLC5A1P13866 664 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 FGFR2P21802 821 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 MAP2K2P36507 400 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 FKBP1BP68106 108 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 PAXIP1Q6ZW49 1069 aaPredicted RBP16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 TBC1D22AQ8WUA7 517 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 AIDAQ96BJ3 306 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 ZBED3Q96IU2 234 aaPredicted RBP16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 ASTN2O75129 1339 aaPredicted RBP16.6■□□□□ 0.25
SIRPB3P-201ENST00000340424 MYO1BO43795 1136 aa16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 GNAI2P04899 355 aa16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 MFSD14BQ5SR56 506 aa16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
SIRPB3P-201ENST00000340424 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 HUNKP57058 714 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 SERPINA10Q9UK55 444 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 PAPPA2Q9BXP8 1791 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 ECM29Q5VYK3 1845 aa16.58■□□□□ 0.24
SIRPB3P-201ENST00000340424 NF2P35240 595 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 SIL1Q9H173 461 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 WBP1LQ9NX94 342 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 SUGT1Q9Y2Z0 365 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 PPP2R3BQ9Y5P8 575 aa16.57■□□□□ 0.24
SIRPB3P-201ENST00000340424 NOGQ13253 232 aa16.56■□□□□ 0.24
SIRPB3P-201ENST00000340424 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
SIRPB3P-201ENST00000340424 CFAP100Q494V2 611 aa16.56■□□□□ 0.24
SIRPB3P-201ENST00000340424 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
SIRPB3P-201ENST00000340424 CCDC102AQ96A19 550 aa16.56■□□□□ 0.24
SIRPB3P-201ENST00000340424 MAST3O60307 1309 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 MS4A1P11836 297 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 BCAMP50895 628 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 HDLBPQ00341 1268 aaKnown RBP16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 RGMBQ6NW40 437 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
SIRPB3P-201ENST00000340424 CA12O43570 354 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 CTCFP49711 727 aaPredicted RBP16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 GRM1Q13255 1194 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
SIRPB3P-201ENST00000340424 WDR66Q8TBY9 1149 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms