RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NBPF9Q3BBW0 867 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 FBXO33Q7Z6M2 555 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 VPS37DQ86XT2 251 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 SULF1Q8IWU6 871 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 FBXO3Q9UK99 471 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 HDAC9Q9UKV0 1011 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 PA2G4Q9UQ80 394 aaKnown RBP18.21■□□□□ 0.51
ERCC1-203ENST00000340192 TLL2Q9Y6L7 1015 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
ERCC1-203ENST00000340192 WNT10BO00744 389 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 GNAI2P04899 355 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 RLBP1P12271 317 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 FKBP1AP62942 108 aaKnown RBP18.2■□□□□ 0.5
ERCC1-203ENST00000340192 MTX1Q13505 466 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 CAVIN4Q5BKX8 364 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
ERCC1-203ENST00000340192 COPRSQ9NQ92 184 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 FAM205AQ6ZU69 1335 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 PITPNM2Q9BZ72 1349 aa18.2■□□□□ 0.5
ERCC1-203ENST00000340192 F8W031 263 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-203ENST00000340192 IFIT1P09914 478 aaKnown RBP18.19■□□□□ 0.5
ERCC1-203ENST00000340192 IQSEC3Q9UPP2 1182 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-203ENST00000340192 SLC5A1P13866 664 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-203ENST00000340192 BCAMP50895 628 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 MFSD14BQ5SR56 506 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 LPIN2Q92539 896 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 CEP126Q9P2H0 1117 aa18.18■□□□□ 0.5
ERCC1-203ENST00000340192 SCAF8Q9UPN6 1271 aaKnown RBP18.18■□□□□ 0.5
ERCC1-203ENST00000340192 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-203ENST00000340192 ZBED3Q96IU2 234 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-203ENST00000340192 WDR33Q9C0J8 1336 aaKnown RBP18.17■□□□□ 0.5
ERCC1-203ENST00000340192 FRAT2O75474 233 aaPredicted RBP18.16■□□□□ 0.5
ERCC1-203ENST00000340192 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
ERCC1-203ENST00000340192 DLGAP5Q15398 846 aa18.16■□□□□ 0.5
ERCC1-203ENST00000340192 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
ERCC1-203ENST00000340192 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
ERCC1-203ENST00000340192 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
ERCC1-203ENST00000340192 PNMA6EA0A0J9YXQ4 647 aa18.15■□□□□ 0.5
ERCC1-203ENST00000340192 CYP4F22Q6NT55 531 aa18.15■□□□□ 0.5
ERCC1-203ENST00000340192 MTMR14Q8NCE2 650 aa18.15■□□□□ 0.5
ERCC1-203ENST00000340192 CAPNS2Q96L46 248 aa18.15■□□□□ 0.5
ERCC1-203ENST00000340192 GBA2Q9HCG7 927 aaPredicted RBP18.15■□□□□ 0.5
ERCC1-203ENST00000340192 PCDHAC2Q9Y5I4 1007 aa18.15■□□□□ 0.5
ERCC1-203ENST00000340192 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
ERCC1-203ENST00000340192 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
ERCC1-203ENST00000340192 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
ERCC1-203ENST00000340192 GRM1Q13255 1194 aa18.14■□□□□ 0.49
ERCC1-203ENST00000340192 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
ERCC1-203ENST00000340192 C2orf69Q8N8R5 385 aa18.14■□□□□ 0.49
ERCC1-203ENST00000340192 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
ERCC1-203ENST00000340192 HHIPL1Q96JK4 782 aa18.14■□□□□ 0.49
ERCC1-203ENST00000340192 TTF2Q9UNY4 1162 aaKnown RBP18.14■□□□□ 0.49
ERCC1-203ENST00000340192 SPDYE2BA6NHP3 402 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 SPDYE6P0CI01 402 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 ECE1P42892 770 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERCC1-203ENST00000340192 HUNKP57058 714 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 TBC1D22AQ8WUA7 517 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 C1orf115Q9H7X2 142 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
ERCC1-203ENST00000340192 TFCP2Q12800 502 aa18.12■□□□□ 0.49
ERCC1-203ENST00000340192 GRIK5Q16478 980 aa18.12■□□□□ 0.49
ERCC1-203ENST00000340192 PRAMEF18Q5VWM3 479 aa18.12■□□□□ 0.49
ERCC1-203ENST00000340192 APOBEC3FQ8IUX4 373 aaKnown RBP18.12■□□□□ 0.49
ERCC1-203ENST00000340192 PRMT6Q96LA8 375 aaPredicted RBP18.12■□□□□ 0.49
ERCC1-203ENST00000340192 PAPPA2Q9BXP8 1791 aa18.12■□□□□ 0.49
ERCC1-203ENST00000340192 MYO1BO43795 1136 aa18.11■□□□□ 0.49
ERCC1-203ENST00000340192 SERPINA10Q9UK55 444 aa18.11■□□□□ 0.49
ERCC1-203ENST00000340192 COL1A1P02452 1464 aaPredicted RBP18.11■□□□□ 0.49
ERCC1-203ENST00000340192 AOX1Q06278 1338 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 CLRN2A0PK11 232 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 AOC2O75106 756 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 MS4A1P11836 297 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 ADORA1P30542 326 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 TIMM10P62072 90 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 ATP8B2P98198 1209 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 POLA2Q14181 598 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 AKAP2Q9Y2D5 859 aa18.1■□□□□ 0.49
ERCC1-203ENST00000340192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.1■□□□□ 0.49
ERCC1-203ENST00000340192 PHKA1P46020 1223 aa18.09■□□□□ 0.49
ERCC1-203ENST00000340192 G3BP1Q13283 466 aaKnown RBP eCLIP18.09■□□□□ 0.49
ERCC1-203ENST00000340192 SSH3Q8TE77 659 aa18.09■□□□□ 0.49
ERCC1-203ENST00000340192 GNL3LQ9NVN8 582 aaKnown RBP18.09■□□□□ 0.49
ERCC1-203ENST00000340192 A0A1B0GUL7 405 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 CRKP46108 304 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 FKBP1BP68106 108 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 CCDC102BQ68D86 513 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 WBP1LQ9NX94 342 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 SUGT1Q9Y2Z0 365 aa18.08■□□□□ 0.48
ERCC1-203ENST00000340192 MAP2K2P36507 400 aa18.07■□□□□ 0.48
ERCC1-203ENST00000340192 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
ERCC1-203ENST00000340192 RGMBQ6NW40 437 aa18.07■□□□□ 0.48
ERCC1-203ENST00000340192 MOB2Q70IA6 237 aa18.07■□□□□ 0.48
ERCC1-203ENST00000340192 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms