RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 HMGN5P82970 282 aaKnown RBP12.63□□□□□ -0.39
SEC24C-201ENST00000339365 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
SEC24C-201ENST00000339365 SEMA3EO15041 775 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 DNTTIP2Q5QJE6 756 aaKnown RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 HELLSQ9NRZ9 838 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 USP40Q9NVE5 1235 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 PRKG1Q13976 671 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 TSR1Q2NL82 804 aaKnown RBP12.62□□□□□ -0.39
SEC24C-201ENST00000339365 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 RAD50Q92878 1312 aa12.62□□□□□ -0.39
SEC24C-201ENST00000339365 EIF5P55010 431 aaKnown RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 TBC1D9Q6ZT07 1266 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 CCDC194A0A1B0GVG4 234 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 K7ELQ4 463 aaPredicted RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 CIAO1O76071 339 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 IARSP41252 1262 aaKnown RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 NLRP5P59047 1200 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 AATFQ9NY61 560 aaKnown RBP eCLIP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 DBNDD1Q9H9R9 158 aa12.61□□□□□ -0.39
SEC24C-201ENST00000339365 SAP30BPQ9UHR5 308 aaKnown RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
SEC24C-201ENST00000339365 CHMP4BP1P59074 171 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 TCP10Q12799 353 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 ZAP70P43403 619 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 METAP2P50579 478 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■□□□ 12
SEC24C-201ENST00000339365 BCAMP50895 628 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 PLS1Q14651 629 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 BSDC1Q9NW68 430 aaPredicted RBP12.6□□□□□ -0.39
SEC24C-201ENST00000339365 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 RAD17O75943 681 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 TPM1P09493 284 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 BRPF1P55201 1214 aaPredicted RBP12.6□□□□□ -0.39
SEC24C-201ENST00000339365 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 TTLL11Q8NHH1 800 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 C8orf76Q96K31 380 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
SEC24C-201ENST00000339365 H7C1W4 665 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 ZBTB43O43298 467 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 CALM1P0DP23 149 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 CALM2P0DP24 149 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 CALM3P0DP25 149 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 LINC00116Q8NCU8 138 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 RNF181Q9P0P0 153 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 LIMCH1Q9UPQ0 1083 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 ATP5JP18859 108 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
SEC24C-201ENST00000339365 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 RBM27Q9P2N5 1060 aaKnown RBP12.59□□□□□ -0.39
SEC24C-201ENST00000339365 KINO60870 393 aaKnown RBP12.59□□□□□ -0.39
SEC24C-201ENST00000339365 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
SEC24C-201ENST00000339365 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.39
SEC24C-201ENST00000339365 SCNN1DP51172 638 aa12.58□□□□□ -0.39
SEC24C-201ENST00000339365 GPR108Q9NPR9 543 aa12.58□□□□□ -0.39
SEC24C-201ENST00000339365 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.39
SEC24C-201ENST00000339365 FAM13BQ9NYF5 915 aa12.58□□□□□ -0.39
SEC24C-201ENST00000339365 BIN2Q9UBW5 565 aaPredicted RBP12.58□□□□□ -0.39
SEC24C-201ENST00000339365 TPM3P06753 285 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 KRT85P78386 507 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 AOX1Q06278 1338 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 CEBPZQ03701 1054 aaKnown RBP12.58□□□□□ -0.4
SEC24C-201ENST00000339365 CCDC83Q8IWF9 413 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 ZHX3Q9H4I2 956 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 IVNS1ABPQ9Y6Y0 642 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 ITPK1Q13572 414 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 MAPKAPK5Q8IW41 473 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 CFAP45Q9UL16 551 aa12.58□□□□□ -0.4
SEC24C-201ENST00000339365 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 GPAA1O43292 621 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 PCMTD1Q96MG8 357 aaPredicted RBP12.57□□□□□ -0.4
SEC24C-201ENST00000339365 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
SEC24C-201ENST00000339365 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 BAG4O95429 457 aaKnown RBP12.57□□□□□ -0.4
SEC24C-201ENST00000339365 ME1P48163 572 aa12.57□□□□□ -0.4
SEC24C-201ENST00000339365 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
SEC24C-201ENST00000339365 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms