RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
SPTLC1-202ENST00000337841 DBNLQ9UJU6 430 aaKnown RBP14.59□□□□□ -0.07
SPTLC1-202ENST00000337841 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
SPTLC1-202ENST00000337841 LMOD1P29536 600 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 DACT2Q5SW24 774 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 WDR66Q8TBY9 1149 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 ZNF526Q8TF50 670 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 TBC1D22AQ8WUA7 517 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 DPF2Q92785 391 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 MYO3BQ8WXR4 1341 aa14.58□□□□□ -0.08
SPTLC1-202ENST00000337841 SPEF2Q9C093 1822 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 IQCA1LA6NCM1 817 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 H7C1D1 291 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 VEGFAP15692 232 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 GMPSP49915 693 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 MMP14P50281 582 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 GPATCH3Q96I76 525 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 CCDC136Q96JN2 1154 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 GPBP1L1Q9HC44 474 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 ZBTB12Q9Y330 459 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 LTBP1Q14766 1721 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 ZNF609O15014 1411 aa14.57□□□□□ -0.08
SPTLC1-202ENST00000337841 ARID4AP29374 1257 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 OGFOD1Q8N543 542 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 ZGPATQ8N5A5 531 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 SPATA5Q8NB90 893 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 TLR7Q9NYK1 1049 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 CNOT7Q9UIV1 285 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 HACL1Q9UJ83 578 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 HDAC9Q9UKV0 1011 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
SPTLC1-202ENST00000337841 COL4A5P29400 1685 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 USP17L8P0C7I0 530 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 NUCB1Q02818 461 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 MFSD14BQ5SR56 506 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 SPTY2D1Q68D10 685 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 CHD1LQ86WJ1 897 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 C16orf71Q8IYS4 520 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 ECHDC1Q9NTX5 307 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 PPP4R2Q9NY27 417 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 HMG20BQ9P0W2 317 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 SBF1O95248 1867 aa14.55□□□□□ -0.08
SPTLC1-202ENST00000337841 ATP5JP18859 108 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 RASGRF1Q13972 1273 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 CENPQQ7L2Z9 268 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 GMLQ99445 158 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 MXD3Q9BW11 206 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 LNPKQ9C0E8 428 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
SPTLC1-202ENST00000337841 KIAA0825Q8IV33 1275 aa14.53□□□□□ -0.08
SPTLC1-202ENST00000337841 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
SPTLC1-202ENST00000337841 SALL1Q9NSC2 1324 aa14.52□□□□□ -0.08
SPTLC1-202ENST00000337841 ERC2O15083 957 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 LDHBP07195 334 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 EPHX2P34913 555 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 EPS15P42566 896 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 MCAMP43121 646 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 SCNN1DP51172 638 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 PNMA8AQ86V59 439 aaPredicted RBP14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 MICALL2Q8IY33 904 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 CERS5Q8N5B7 392 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 ZNF784Q8NCA9 323 aaPredicted RBP14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 NMRK2Q9NPI5 230 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 ADARB2Q9NS39 739 aaKnown RBP14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 ABCF2Q9UG63 623 aa14.52□□□□□ -0.09
SPTLC1-202ENST00000337841 TTC41PQ6P2S7 1318 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 POTECB2RU33 542 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 F8W031 263 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 IGSF3O75054 1194 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 MX1P20591 662 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 ZAP70P43403 619 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 ZNF280AP59817 542 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 SCARF1Q14162 830 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 RBM26Q5T8P6 1007 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 USP50Q70EL3 339 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 ERICH6Q7L0X2 663 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 MRIQ9BWK5 157 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 BOLA2Q9H3K6 86 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 TAF1DQ9H5J8 278 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 LRP2BPQ9P2M1 347 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 TTF2Q9UNY4 1162 aaKnown RBP14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 CHD4Q14839 1912 aa14.51□□□□□ -0.09
SPTLC1-202ENST00000337841 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 MAST3O60307 1309 aa14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 HDLBPQ00341 1268 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 SLF2Q8IX21 1173 aa14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 STAP2Q9UGK3 403 aa14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 DICER1Q9UPY3 1922 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-202ENST00000337841 GOLGB1Q14789 3259 aaKnown RBP14.49□□□□□ -0.09
SPTLC1-202ENST00000337841 CYP2E1P05181 493 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms