RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LRP2BPQ9P2M1 347 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 WWC3Q9ULE0 1092 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 MAST3O60307 1309 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 M0R2C6 588 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 SEMA3EO15041 775 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 ZNF804AQ7Z570 1209 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 APPBP2Q92624 585 aa17.65■□□□□ 0.42
CBX3-201ENST00000337620 MYO5AQ9Y4I1 1855 aaKnown RBP17.65■□□□□ 0.42
CBX3-201ENST00000337620 PDE6AP16499 860 aa17.64■□□□□ 0.41
CBX3-201ENST00000337620 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
CBX3-201ENST00000337620 RABEP1Q15276 862 aa17.64■□□□□ 0.41
CBX3-201ENST00000337620 PRPF40BQ6NWY9 871 aaKnown RBP17.64■□□□□ 0.41
CBX3-201ENST00000337620 MPNDQ8N594 471 aa17.64■□□□□ 0.41
CBX3-201ENST00000337620 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
CBX3-201ENST00000337620 PUS7LQ9H0K6 701 aaKnown RBP17.64■□□□□ 0.41
CBX3-201ENST00000337620 ZNF219Q9P2Y4 722 aaPredicted RBP17.64■□□□□ 0.41
CBX3-201ENST00000337620 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
CBX3-201ENST00000337620 ZNF532Q9HCE3 1301 aa17.64■□□□□ 0.41
CBX3-201ENST00000337620 ANAPC15P60006 121 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
CBX3-201ENST00000337620 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 MTFR1LQ9H019 292 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 COL1A1P02452 1464 aaPredicted RBP17.63■□□□□ 0.41
CBX3-201ENST00000337620 MYH7P12883 1935 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 UBE3CQ15386 1083 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 DPP8Q6V1X1 898 aaPredicted RBP17.63■□□□□ 0.41
CBX3-201ENST00000337620 CACNA1SQ13698 1873 aa17.63■□□□□ 0.41
CBX3-201ENST00000337620 C10orf71Q711Q0 1435 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 POLD1P28340 1107 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 RAI14Q9P0K7 980 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 JAG2Q9Y219 1238 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
CBX3-201ENST00000337620 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 SNX14Q9Y5W7 946 aa17.62■□□□□ 0.41
CBX3-201ENST00000337620 TCRBV5S4A2TA0A5A2 114 aa17.61■□□□□ 0.41
CBX3-201ENST00000337620 RIMBP2O15034 1052 aa17.61■□□□□ 0.41
CBX3-201ENST00000337620 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
CBX3-201ENST00000337620 A0A0G2JLW4 131 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 CREB3L3Q68CJ9 461 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
CBX3-201ENST00000337620 CD209Q9NNX6 404 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 GPAA1O43292 621 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 HSPD1P10809 573 aaKnown RBP17.6■□□□□ 0.41
CBX3-201ENST00000337620 PDS5AQ29RF7 1337 aaKnown RBP17.6■□□□□ 0.41
CBX3-201ENST00000337620 SLX4Q8IY92 1834 aa17.6■□□□□ 0.41
CBX3-201ENST00000337620 MYH13Q9UKX3 1938 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 DOCK2Q92608 1830 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 ZKSCAN1P17029 563 aaPredicted RBP17.59■□□□□ 0.41
CBX3-201ENST00000337620 SNX21Q969T3 373 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 DSCC1Q9BVC3 393 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
CBX3-201ENST00000337620 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
CBX3-201ENST00000337620 SLC27A2O14975 620 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 DPEP1P16444 411 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 NEK4P51957 841 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 RNF20Q5VTR2 975 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 AIDAQ96BJ3 306 aa17.59■□□□□ 0.41
CBX3-201ENST00000337620 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
CBX3-201ENST00000337620 CD2BP2O95400 341 aaKnown RBP17.58■□□□□ 0.4
CBX3-201ENST00000337620 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.4
CBX3-201ENST00000337620 ST18O60284 1047 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 IL1R1P14778 569 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 CYP7A1P22680 504 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 TTLL6Q8N841 843 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 WDR66Q8TBY9 1149 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 IL17RAQ96F46 866 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 UPF3BQ9BZI7 483 aaKnown RBP17.57■□□□□ 0.4
CBX3-201ENST00000337620 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
CBX3-201ENST00000337620 ZBTB22O15209 634 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 KCNB2Q92953 911 aa17.57■□□□□ 0.4
CBX3-201ENST00000337620 C21orf2O43822 256 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 PRDX5P30044 214 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
CBX3-201ENST00000337620 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 EYA3Q99504 573 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 G3V3G9 751 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 MBD4O95243 580 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 KCNA3P22001 575 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
CBX3-201ENST00000337620 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
CBX3-201ENST00000337620 MIGA1Q8NAN2 632 aa17.56■□□□□ 0.4
CBX3-201ENST00000337620 JAKMIP1Q96N16 626 aaKnown RBP17.56■□□□□ 0.4
CBX3-201ENST00000337620 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 APPP05067 770 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 MECOMQ03112 1051 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
CBX3-201ENST00000337620 COA1Q9GZY4 146 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 ARMT1Q9H993 441 aa17.55■□□□□ 0.4
CBX3-201ENST00000337620 CYP21A2P08686 494 aa17.54■□□□□ 0.4
CBX3-201ENST00000337620 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms