RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TBC1D22AQ8WUA7 517 aa18.83■□□□□ 0.61
SEC13-201ENST00000337354 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.6
SEC13-201ENST00000337354 KIF3CO14782 793 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 ARID4AP29374 1257 aaPredicted RBP18.82■□□□□ 0.6
SEC13-201ENST00000337354 MMP14P50281 582 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 NUCB1Q02818 461 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 TTC39AQ5SRH9 613 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 DACT2Q5SW24 774 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
SEC13-201ENST00000337354 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 DPF2Q92785 391 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 CCDC136Q96JN2 1154 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
SEC13-201ENST00000337354 PDS5AQ29RF7 1337 aaKnown RBP18.82■□□□□ 0.6
SEC13-201ENST00000337354 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 WDR66Q8TBY9 1149 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 L3MBTL3Q96JM7 780 aaPredicted RBP18.81■□□□□ 0.6
SEC13-201ENST00000337354 RRAGCQ9HB90 399 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 PPP4R2Q9NY27 417 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 TLR7Q9NYK1 1049 aaKnown RBP18.81■□□□□ 0.6
SEC13-201ENST00000337354 IQSEC3Q9UPP2 1182 aaPredicted RBP18.81■□□□□ 0.6
SEC13-201ENST00000337354 SCN4AP35499 1836 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 B4GALNT3Q6L9W6 998 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 CENPQQ7L2Z9 268 aaPredicted RBP18.81■□□□□ 0.6
SEC13-201ENST00000337354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.81■□□□□ 0.6
SEC13-201ENST00000337354 FBXW7Q969H0 707 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 BCL11AQ9H165 835 aa18.81■□□□□ 0.6
SEC13-201ENST00000337354 C1QTNF8P60827 252 aa18.8■□□□□ 0.6
SEC13-201ENST00000337354 RASGRF1Q13972 1273 aa18.8■□□□□ 0.6
SEC13-201ENST00000337354 SPATA5Q8NB90 893 aa18.8■□□□□ 0.6
SEC13-201ENST00000337354 GPATCH3Q96I76 525 aa18.8■□□□□ 0.6
SEC13-201ENST00000337354 SUGT1Q9Y2Z0 365 aa18.8■□□□□ 0.6
SEC13-201ENST00000337354 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
SEC13-201ENST00000337354 ZGPATQ8N5A5 531 aaKnown RBP18.79■□□□□ 0.6
SEC13-201ENST00000337354 GMLQ99445 158 aa18.79■□□□□ 0.6
SEC13-201ENST00000337354 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
SEC13-201ENST00000337354 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
SEC13-201ENST00000337354 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
SEC13-201ENST00000337354 SALL1Q9NSC2 1324 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 IGSF3O75054 1194 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 ATP5JP18859 108 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 LMOD1P29536 600 aaPredicted RBP18.78■□□□□ 0.6
SEC13-201ENST00000337354 GMPSP49915 693 aaPredicted RBP18.78■□□□□ 0.6
SEC13-201ENST00000337354 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
SEC13-201ENST00000337354 MFSD14BQ5SR56 506 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 OGFOD1Q8N543 542 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 LNPKQ9C0E8 428 aa18.78■□□□□ 0.6
SEC13-201ENST00000337354 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
SEC13-201ENST00000337354 VEGFAP15692 232 aaPredicted RBP18.77■□□□□ 0.6
SEC13-201ENST00000337354 MCAMP43121 646 aa18.77■□□□□ 0.6
SEC13-201ENST00000337354 GPRC5DQ9NZD1 345 aa18.77■□□□□ 0.6
SEC13-201ENST00000337354 H7C1D1 291 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 ERC2O15083 957 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 SCNN1DP51172 638 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 SCARF1Q14162 830 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 SPTY2D1Q68D10 685 aaPredicted RBP18.76■□□□□ 0.59
SEC13-201ENST00000337354 CNOT7Q9UIV1 285 aaKnown RBP18.76■□□□□ 0.59
SEC13-201ENST00000337354 HACL1Q9UJ83 578 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 JAG2Q9Y219 1238 aa18.76■□□□□ 0.59
SEC13-201ENST00000337354 MX1P20591 662 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 CERS5Q8N5B7 392 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 MXD3Q9BW11 206 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 MRIQ9BWK5 157 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 STAP2Q9UGK3 403 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 HDAC9Q9UKV0 1011 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 PSME4Q14997 1843 aa18.75■□□□□ 0.59
SEC13-201ENST00000337354 TOMM70O94826 608 aa18.74■□□□□ 0.59
SEC13-201ENST00000337354 ZNF280AP59817 542 aaPredicted RBP18.74■□□□□ 0.59
SEC13-201ENST00000337354 KIAA0825Q8IV33 1275 aa18.74■□□□□ 0.59
SEC13-201ENST00000337354 SALL3Q9BXA9 1300 aa18.74■□□□□ 0.59
SEC13-201ENST00000337354 POTECB2RU33 542 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 GLRX3O76003 335 aaKnown RBP18.73■□□□□ 0.59
SEC13-201ENST00000337354 ZAP70P43403 619 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 HDLBPQ00341 1268 aaKnown RBP18.73■□□□□ 0.59
SEC13-201ENST00000337354 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
SEC13-201ENST00000337354 MICALL2Q8IY33 904 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 HAUS7Q99871 368 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 BOLA2Q9H3K6 86 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 SNRKQ9NRH2 765 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 ADARB2Q9NS39 739 aaKnown RBP18.73■□□□□ 0.59
SEC13-201ENST00000337354 ABCF2Q9UG63 623 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 SCN9AQ15858 1988 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 MAST3O60307 1309 aa18.73■□□□□ 0.59
SEC13-201ENST00000337354 LDHBP07195 334 aaKnown RBP18.72■□□□□ 0.59
SEC13-201ENST00000337354 EPS15P42566 896 aa18.72■□□□□ 0.59
SEC13-201ENST00000337354 PDE1AP54750 535 aa18.72■□□□□ 0.59
SEC13-201ENST00000337354 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
SEC13-201ENST00000337354 PNMA8AQ86V59 439 aaPredicted RBP18.72■□□□□ 0.59
SEC13-201ENST00000337354 RBM46Q8TBY0 533 aaKnown RBP18.72■□□□□ 0.59
SEC13-201ENST00000337354 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
SEC13-201ENST00000337354 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
SEC13-201ENST00000337354 TTF2Q9UNY4 1162 aaKnown RBP18.72■□□□□ 0.59
SEC13-201ENST00000337354 CYP2E1P05181 493 aaPredicted RBP18.71■□□□□ 0.59
SEC13-201ENST00000337354 EPHX2P34913 555 aa18.71■□□□□ 0.59
SEC13-201ENST00000337354 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
SEC13-201ENST00000337354 USP50Q70EL3 339 aaPredicted RBP18.71■□□□□ 0.59
SEC13-201ENST00000337354 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
SEC13-201ENST00000337354 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SEC13-201ENST00000337354 LRP2BPQ9P2M1 347 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms