RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TOMM22Q9NS69 142 aa19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 TERF2Q15554 542 aa19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 LRRFIP1Q32MZ4 808 aaKnown RBP19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 MRPS27Q92552 414 aaKnown RBP19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 DSCC1Q9BVC3 393 aa19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 MAST3O60307 1309 aa19.2■□□□□ 0.66
CDC42EP4-201ENST00000335793 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 TRDNQ13061 729 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 SMARCC2Q8TAQ2 1214 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 OSBP2Q969R2 916 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 CTNNA3Q9UI47 895 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 PCDHA7Q9UN72 937 aa19.19■□□□□ 0.66
CDC42EP4-201ENST00000335793 PRC1O43663 620 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 DHX16O60231 1041 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 RXRAP19793 462 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 ATG9AQ7Z3C6 839 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 LRRC8AQ8IWT6 810 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 FEZ1Q99689 392 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 NBPF26B4DH59 902 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 M0R2C6 588 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 NBPF14Q5TI25 921 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 NBPF10Q6P3W6 841 aaKnown RBP19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 NBPF15Q8N660 670 aa19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 SYTL4Q96C24 671 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP4-201ENST00000335793 FOXO4P98177 505 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 STRN4Q9NRL3 753 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 ZNF213O14771 459 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 ADORA1P30542 326 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 RSPH14Q9UHP6 348 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 SH3TC1Q8TE82 1336 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 SMTNL1A8MU46 457 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 TPM4P67936 248 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 IQCB1Q15051 598 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 PI16Q6UXB8 463 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 STK11IPQ8N1F8 1099 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 PRDM11Q9NQV5 511 aa19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP4-201ENST00000335793 NRDCO43847 1150 aa19.16■□□□□ 0.66
CDC42EP4-201ENST00000335793 CLIC4Q9Y696 253 aa19.16■□□□□ 0.66
CDC42EP4-201ENST00000335793 H7C1W4 665 aa19.16■□□□□ 0.66
CDC42EP4-201ENST00000335793 NDUFA8P51970 172 aa19.16■□□□□ 0.66
CDC42EP4-201ENST00000335793 RBM43Q6ZSC3 357 aaKnown RBP19.16■□□□□ 0.66
CDC42EP4-201ENST00000335793 IDH1O75874 414 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 GPTP24298 496 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 ADD1P35611 737 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 GABPB1Q06547 395 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 NFXL1Q6ZNB6 911 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 CALCOCO1Q9P1Z2 691 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 USP27XA6NNY8 438 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 FGAP02671 866 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 EXOSC10Q01780 885 aaKnown RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 TMC6Q7Z403 805 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 XAGE2Q96GT9 111 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 PAXBP1Q9Y5B6 917 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 SPTLC2O15270 562 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 ANKRD7Q92527 254 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 ZNF274Q96GC6 653 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 KCNG1Q9UIX4 513 aa19.15■□□□□ 0.66
CDC42EP4-201ENST00000335793 CARMIL3Q8ND23 1372 aa19.14■□□□□ 0.66
CDC42EP4-201ENST00000335793 ZAP70P43403 619 aa19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 HOMER1Q86YM7 354 aa19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 GPATCH11Q8N954 259 aa19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 KDM3BQ7LBC6 1761 aa19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 SNW1Q13573 536 aaKnown RBP19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 METTL24Q5JXM2 366 aa19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
CDC42EP4-201ENST00000335793 LMOD1P29536 600 aaPredicted RBP19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 HNRNPH2P55795 449 aaKnown RBP19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 NCOA7Q8NI08 942 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 CNNM1Q9NRU3 951 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 IFNKQ9P0W0 207 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 IFIT5Q13325 482 aaKnown RBP19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 GYS2P54840 703 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 LRP10Q7Z4F1 713 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 AKAP2Q9Y2D5 859 aa19.13■□□□□ 0.65
CDC42EP4-201ENST00000335793 DPCR1Q3MIW9 517 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 MICU3Q86XE3 530 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 MRFAP1L1Q96HT8 127 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 NEMFO60524 1076 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 ADALQ6DHV7 355 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 CPLX2Q6PUV4 134 aaKnown RBP19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 LDHAL6AQ6ZMR3 332 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 CASP7P55210 303 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 EVA1CP58658 441 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 CNPY4Q8N129 248 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 KCNG4Q8TDN1 519 aa19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 PUS7LQ9H0K6 701 aaKnown RBP19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 FEZ2Q9UHY8 353 aaPredicted RBP19.12■□□□□ 0.65
CDC42EP4-201ENST00000335793 KAT6BQ8WYB5 2073 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms