RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 OSBP2Q969R2 916 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 WWC3Q9ULE0 1092 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 DOCK2Q92608 1830 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 DLEC1Q9Y238 1755 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 MPNDQ8N594 471 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 DENND2AQ9ULE3 1009 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 DPEP1P16444 411 aa28.01■■■□□ 2.07
TSEN54-201ENST00000333213 POLD1P28340 1107 aa28.01■■■□□ 2.07
TSEN54-201ENST00000333213 ADD2P35612 726 aa28.01■■■□□ 2.07
TSEN54-201ENST00000333213 MYH7P12883 1935 aa28.01■■■□□ 2.07
TSEN54-201ENST00000333213 C6orf229H3BNL8 230 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 SEMA3EO15041 775 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 SLC9C2Q5TAH2 1124 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 HELLSQ9NRZ9 838 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 MAST3O60307 1309 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 CCDC171Q6TFL3 1326 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 ZBTB22O15209 634 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 EPB41L2O43491 1005 aaKnown RBP28■■■□□ 2.07
TSEN54-201ENST00000333213 ZFYP08048 801 aaPredicted RBP28■■■□□ 2.07
TSEN54-201ENST00000333213 TDRD7Q8NHU6 1098 aaKnown RBP28■■■□□ 2.07
TSEN54-201ENST00000333213 PALD1Q9ULE6 856 aa28■■■□□ 2.07
TSEN54-201ENST00000333213 M0R2C6 588 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 PTGER2P43116 358 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 KIAA1211Q6ZU35 1233 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 PUS7LQ9H0K6 701 aaKnown RBP27.99■■■□□ 2.07
TSEN54-201ENST00000333213 ZNF219Q9P2Y4 722 aaPredicted RBP27.99■■■□□ 2.07
TSEN54-201ENST00000333213 SNED1Q8TER0 1413 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 KIAA1551Q9HCM1 1747 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 SRCAPQ6ZRS2 3230 aa27.99■■■□□ 2.07
TSEN54-201ENST00000333213 TCRBV5S4A2TA0A5A2 114 aa27.98■■■□□ 2.07
TSEN54-201ENST00000333213 DPP8Q6V1X1 898 aaPredicted RBP27.98■■■□□ 2.07
TSEN54-201ENST00000333213 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.98■■■□□ 2.07
TSEN54-201ENST00000333213 PDE6AP16499 860 aa27.98■■■□□ 2.07
TSEN54-201ENST00000333213 CD209Q9NNX6 404 aa27.98■■■□□ 2.07
TSEN54-201ENST00000333213 JAG2Q9Y219 1238 aa27.98■■■□□ 2.07
TSEN54-201ENST00000333213 PDS5AQ29RF7 1337 aaKnown RBP27.97■■■□□ 2.07
TSEN54-201ENST00000333213 FRAT2O75474 233 aaPredicted RBP27.97■■■□□ 2.07
TSEN54-201ENST00000333213 HSPA4P34932 840 aa27.97■■■□□ 2.07
TSEN54-201ENST00000333213 LRRFIP1Q32MZ4 808 aaKnown RBP27.97■■■□□ 2.07
TSEN54-201ENST00000333213 APPBP2Q92624 585 aa27.97■■■□□ 2.07
TSEN54-201ENST00000333213 MAP4K1Q92918 833 aa27.97■■■□□ 2.07
TSEN54-201ENST00000333213 ZNF532Q9HCE3 1301 aa27.97■■■□□ 2.07
TSEN54-201ENST00000333213 MYH13Q9UKX3 1938 aa27.97■■■□□ 2.07
TSEN54-201ENST00000333213 UBE3CQ15386 1083 aa27.96■■■□□ 2.07
TSEN54-201ENST00000333213 ZNF804AQ7Z570 1209 aa27.96■■■□□ 2.07
TSEN54-201ENST00000333213 ABCF2Q9UG63 623 aa27.96■■■□□ 2.07
TSEN54-201ENST00000333213 WASHC4Q2M389 1173 aa27.96■■■□□ 2.07
TSEN54-201ENST00000333213 VPS53Q5VIR6 699 aa27.96■■■□□ 2.07
TSEN54-201ENST00000333213 RIMBP2O15034 1052 aa27.95■■■□□ 2.06
TSEN54-201ENST00000333213 IL1R1P14778 569 aa27.95■■■□□ 2.06
TSEN54-201ENST00000333213 MAP3K12Q12852 859 aa27.95■■■□□ 2.06
TSEN54-201ENST00000333213 ZSCAN25Q6NSZ9 544 aa27.95■■■□□ 2.06
TSEN54-201ENST00000333213 MAGEB6Q8N7X4 407 aa27.95■■■□□ 2.06
TSEN54-201ENST00000333213 CHAF1AQ13111 956 aaPredicted RBP27.94■■■□□ 2.06
TSEN54-201ENST00000333213 TTLL6Q8N841 843 aa27.94■■■□□ 2.06
TSEN54-201ENST00000333213 LRP2BPQ9P2M1 347 aa27.94■■■□□ 2.06
TSEN54-201ENST00000333213 ZNF384Q8TF68 577 aa27.94■■■□□ 2.06
TSEN54-201ENST00000333213 TMX4Q9H1E5 349 aaPredicted RBP27.94■■■□□ 2.06
TSEN54-201ENST00000333213 C21orf2O43822 256 aa27.93■■■□□ 2.06
TSEN54-201ENST00000333213 TGFB2P61812 414 aa27.93■■■□□ 2.06
TSEN54-201ENST00000333213 NECTIN1Q15223 517 aa27.93■■■□□ 2.06
TSEN54-201ENST00000333213 UTRNP46939 3433 aa27.93■■■□□ 2.06
TSEN54-201ENST00000333213 RASEFQ8IZ41 740 aa27.92■■■□□ 2.06
TSEN54-201ENST00000333213 RBM8AQ9Y5S9 174 aaKnown RBP27.92■■■□□ 2.06
TSEN54-201ENST00000333213 FOXP2O15409 715 aa27.92■■■□□ 2.06
TSEN54-201ENST00000333213 ADGRA1Q86SQ6 560 aa27.91■■■□□ 2.06
TSEN54-201ENST00000333213 IL17RAQ96F46 866 aa27.91■■■□□ 2.06
TSEN54-201ENST00000333213 RTFDC1Q9BY42 306 aaPredicted RBP27.91■■■□□ 2.06
TSEN54-201ENST00000333213 ZC3H12CQ9C0D7 883 aaKnown RBP27.91■■■□□ 2.06
TSEN54-201ENST00000333213 PRDX5P30044 214 aa27.9■■■□□ 2.06
TSEN54-201ENST00000333213 HSPD1P10809 573 aaKnown RBP27.9■■■□□ 2.06
TSEN54-201ENST00000333213 MCCP23508 829 aa27.9■■■□□ 2.06
TSEN54-201ENST00000333213 RAI14Q9P0K7 980 aa27.9■■■□□ 2.06
TSEN54-201ENST00000333213 PPP1R1BQ9UD71 204 aaPredicted RBP27.9■■■□□ 2.06
TSEN54-201ENST00000333213 CHD4Q14839 1912 aa27.9■■■□□ 2.06
TSEN54-201ENST00000333213 GPAA1O43292 621 aa27.89■■■□□ 2.06
TSEN54-201ENST00000333213 ANAPC15P60006 121 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 GRIK5Q16478 980 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 KCNB2Q92953 911 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 SNX14Q9Y5W7 946 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 SALL1Q9NSC2 1324 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 COA1Q9GZY4 146 aa27.88■■■□□ 2.05
TSEN54-201ENST00000333213 DOK7Q18PE1 504 aa27.87■■■□□ 2.05
TSEN54-201ENST00000333213 CC2D2BQ6DHV5 1058 aa27.87■■■□□ 2.05
TSEN54-201ENST00000333213 NSUN4Q96CB9 384 aaKnown RBP27.87■■■□□ 2.05
TSEN54-201ENST00000333213 TAF6LQ9Y6J9 622 aa27.87■■■□□ 2.05
TSEN54-201ENST00000333213 CD2BP2O95400 341 aaKnown RBP27.86■■■□□ 2.05
TSEN54-201ENST00000333213 CREB3L3Q68CJ9 461 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 WDR66Q8TBY9 1149 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 DSCC1Q9BVC3 393 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 PIM2Q9P1W9 311 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 MECOMQ03112 1051 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 EYA3Q99504 573 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 CD2APQ9Y5K6 639 aa27.86■■■□□ 2.05
TSEN54-201ENST00000333213 BRCA1P38398 1863 aaKnown RBP27.86■■■□□ 2.05
TSEN54-201ENST00000333213 CYP7A1P22680 504 aa27.85■■■□□ 2.05
TSEN54-201ENST00000333213 SLC4A3P48751 1232 aa27.85■■■□□ 2.05
TSEN54-201ENST00000333213 SLC27A2O14975 620 aa27.84■■■□□ 2.05
TSEN54-201ENST00000333213 RABEP1Q15276 862 aa27.84■■■□□ 2.05
TSEN54-201ENST00000333213 KLHL34Q8N239 644 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms