RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 CIAO1O76071 339 aa15.28■□□□□ 0.04
CMTM1-203ENST00000333001 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
CMTM1-203ENST00000333001 TRIM27P14373 513 aa15.28■□□□□ 0.04
CMTM1-203ENST00000333001 PTPN12Q05209 780 aaKnown RBP15.28■□□□□ 0.04
CMTM1-203ENST00000333001 PUM3Q15397 648 aaKnown RBP15.28■□□□□ 0.04
CMTM1-203ENST00000333001 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
CMTM1-203ENST00000333001 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
CMTM1-203ENST00000333001 TDRD7Q8NHU6 1098 aaKnown RBP15.28■□□□□ 0.04
CMTM1-203ENST00000333001 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
CMTM1-203ENST00000333001 WNT10BO00744 389 aa15.27■□□□□ 0.04
CMTM1-203ENST00000333001 RFX5P48382 616 aaPredicted RBP15.27■□□□□ 0.04
CMTM1-203ENST00000333001 FBXO33Q7Z6M2 555 aa15.27■□□□□ 0.04
CMTM1-203ENST00000333001 VGLL2Q8N8G2 317 aa15.27■□□□□ 0.04
CMTM1-203ENST00000333001 MEIS3Q99687 375 aa15.27■□□□□ 0.04
CMTM1-203ENST00000333001 LRRFIP2Q9Y608 721 aaKnown RBP15.27■□□□□ 0.04
CMTM1-203ENST00000333001 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-203ENST00000333001 HSPA8P11142 646 aaKnown RBP15.26■□□□□ 0.03
CMTM1-203ENST00000333001 MAP2K2P36507 400 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 GYG1P46976 350 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 FKBP1BP68106 108 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 GRM1Q13255 1194 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 DLGAP5Q15398 846 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 MTMR14Q8NCE2 650 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 KLHDC4Q8TBB5 520 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 CAPNS2Q96L46 248 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 GBA2Q9HCG7 927 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-203ENST00000333001 CEP126Q9P2H0 1117 aa15.26■□□□□ 0.03
CMTM1-203ENST00000333001 ZNF646O15015 1829 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-203ENST00000333001 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 MYO1BO43795 1136 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 GNAI2P04899 355 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 SLC5A1P13866 664 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 IL15P40933 162 aaPredicted RBP15.25■□□□□ 0.03
CMTM1-203ENST00000333001 NBPF9Q3BBW0 867 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
CMTM1-203ENST00000333001 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 LPIN2Q92539 896 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 COPRSQ9NQ92 184 aa15.25■□□□□ 0.03
CMTM1-203ENST00000333001 FGFR2P21802 821 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 NF2P35240 595 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 HUNKP57058 714 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 MTX1Q13505 466 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 ATG9AQ7Z3C6 839 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
CMTM1-203ENST00000333001 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
CMTM1-203ENST00000333001 ASTN2O75129 1339 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-203ENST00000333001 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
CMTM1-203ENST00000333001 CYP4F22Q6NT55 531 aa15.23■□□□□ 0.03
CMTM1-203ENST00000333001 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
CMTM1-203ENST00000333001 ABHD8Q96I13 439 aa15.23■□□□□ 0.03
CMTM1-203ENST00000333001 ZBED3Q96IU2 234 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-203ENST00000333001 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
CMTM1-203ENST00000333001 MS4A1P11836 297 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 NOGQ13253 232 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 CFAP100Q494V2 611 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 RGMBQ6NW40 437 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
CMTM1-203ENST00000333001 SIL1Q9H173 461 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
CMTM1-203ENST00000333001 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 SUGT1Q9Y2Z0 365 aa15.22■□□□□ 0.03
CMTM1-203ENST00000333001 BCAMP50895 628 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 RBM5P52756 815 aaKnown RBP eCLIP15.21■□□□□ 0.03
CMTM1-203ENST00000333001 HDLBPQ00341 1268 aaKnown RBP15.21■□□□□ 0.03
CMTM1-203ENST00000333001 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 TMEM57Q8N5G2 664 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
CMTM1-203ENST00000333001 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 PPP2R3BQ9Y5P8 575 aa15.21■□□□□ 0.03
CMTM1-203ENST00000333001 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 CA12O43570 354 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 WDR66Q8TBY9 1149 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 JAG2Q9Y219 1238 aa15.2■□□□□ 0.02
CMTM1-203ENST00000333001 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
CMTM1-203ENST00000333001 MAST3O60307 1309 aa15.19■□□□□ 0.02
CMTM1-203ENST00000333001 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
CMTM1-203ENST00000333001 SEMA3EO15041 775 aa15.19■□□□□ 0.02
CMTM1-203ENST00000333001 ZBTB22O15209 634 aa15.19■□□□□ 0.02
CMTM1-203ENST00000333001 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-203ENST00000333001 CHAF1AQ13111 956 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-203ENST00000333001 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
CMTM1-203ENST00000333001 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-203ENST00000333001 IQSEC3Q9UPP2 1182 aaPredicted RBP15.19■□□□□ 0.02
CMTM1-203ENST00000333001 PA2G4Q9UQ80 394 aaKnown RBP15.19■□□□□ 0.02
CMTM1-203ENST00000333001 THSD7BQ9C0I4 1608 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 ECM29Q5VYK3 1845 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 G3BP1Q13283 466 aaKnown RBP eCLIP15.18■□□□□ 0.02
CMTM1-203ENST00000333001 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 ARMC9Q7Z3E5 817 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 ITPRIPQ8IWB1 547 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
CMTM1-203ENST00000333001 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
CMTM1-203ENST00000333001 PAPPA2Q9BXP8 1791 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms