RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 AKAP11Q9UKA4 1901 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 SLC34A2O95436 690 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 HDAC1Q13547 482 aaPredicted RBP12.06□□□□□ -0.48
SYN3-201ENST00000332840 UBE4AQ14139 1066 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 THSD7BQ9C0I4 1608 aa12.06□□□□□ -0.48
SYN3-201ENST00000332840 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
SYN3-201ENST00000332840 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
SYN3-201ENST00000332840 ZNF280AP59817 542 aaPredicted RBP12.05□□□□□ -0.48
SYN3-201ENST00000332840 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
SYN3-201ENST00000332840 TAF5LO75529 589 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 CDC37L1Q7L3B6 337 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
SYN3-201ENST00000332840 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 TRAF5O00463 557 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 IL1R1P14778 569 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
SYN3-201ENST00000332840 METTL24Q5JXM2 366 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 TTLL5Q6EMB2 1281 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
SYN3-201ENST00000332840 TRPM4Q8TD43 1214 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 GMLQ99445 158 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 CD209Q9NNX6 404 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 HDAC9Q9UKV0 1011 aa12.03□□□□□ -0.48
SYN3-201ENST00000332840 MYH3P11055 1940 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 EYA2O00167 538 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 AOC2O75106 756 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 CIAO1O76071 339 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 KLRK1P26718 216 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
SYN3-201ENST00000332840 TBC1D10BQ4KMP7 808 aaPredicted RBP12.02□□□□□ -0.49
SYN3-201ENST00000332840 CAVIN4Q5BKX8 364 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 SAMD7Q7Z3H4 446 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.49
SYN3-201ENST00000332840 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
SYN3-201ENST00000332840 WTIPA6NIX2 430 aaPredicted RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 PDE8BO95263 885 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 MTX1Q13505 466 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 PUM3Q15397 648 aaKnown RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 VPS37DQ86XT2 251 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 MEIS3Q99687 375 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 PUS3Q9BZE2 481 aaKnown RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 LRRFIP2Q9Y608 721 aaKnown RBP12.01□□□□□ -0.49
SYN3-201ENST00000332840 IRS2Q9Y4H2 1338 aa12.01□□□□□ -0.49
SYN3-201ENST00000332840 SASH1O94885 1247 aa12□□□□□ -0.49
SYN3-201ENST00000332840 GNAI2P04899 355 aa12□□□□□ -0.49
SYN3-201ENST00000332840 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
SYN3-201ENST00000332840 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
SYN3-201ENST00000332840 GTF2IP78347 998 aa12□□□□□ -0.49
SYN3-201ENST00000332840 MAP2K1Q02750 393 aaPredicted RBP12□□□□□ -0.49
SYN3-201ENST00000332840 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
SYN3-201ENST00000332840 PTPN12Q05209 780 aaKnown RBP12□□□□□ -0.49
SYN3-201ENST00000332840 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
SYN3-201ENST00000332840 SMC5Q8IY18 1101 aa12□□□□□ -0.49
SYN3-201ENST00000332840 C1orf115Q9H7X2 142 aa12□□□□□ -0.49
SYN3-201ENST00000332840 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
SYN3-201ENST00000332840 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 SLC5A1P13866 664 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
SYN3-201ENST00000332840 LRRC24Q50LG9 513 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 VGLL2Q8N8G2 317 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 LPIN2Q92539 896 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 GCC1Q96CN9 775 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 GLIS2Q9BZE0 524 aaPredicted RBP11.99□□□□□ -0.49
SYN3-201ENST00000332840 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
SYN3-201ENST00000332840 FAM205AQ6ZU69 1335 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 SNAP23O00161 211 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 SRGAP3O43295 1099 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 FRAT2O75474 233 aaPredicted RBP11.98□□□□□ -0.49
SYN3-201ENST00000332840 CELF2O95319 508 aaKnown RBP11.98□□□□□ -0.49
SYN3-201ENST00000332840 SCARF1Q14162 830 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 KIAA0825Q8IV33 1275 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 TDRD7Q8NHU6 1098 aaKnown RBP11.98□□□□□ -0.49
SYN3-201ENST00000332840 KLHDC4Q8TBB5 520 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 TBC1D22AQ8WUA7 517 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 HHIPL1Q96JK4 782 aa11.98□□□□□ -0.49
SYN3-201ENST00000332840 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
SYN3-201ENST00000332840 MYO1BO43795 1136 aa11.97□□□□□ -0.49
SYN3-201ENST00000332840 HMMRO75330 724 aa11.97□□□□□ -0.49
SYN3-201ENST00000332840 EGFRP00533 1210 aa11.97□□□□□ -0.49
SYN3-201ENST00000332840 ECE1P42892 770 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms