RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IKBKBO14920 756 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 EIF3JO75822 258 aaKnown RBP28.08■■■□□ 2.09
SOX1-201ENST00000330949 PWP2Q15269 919 aaKnown RBP28.08■■■□□ 2.09
SOX1-201ENST00000330949 ADALQ6DHV7 355 aa28.08■■■□□ 2.09
SOX1-201ENST00000330949 HNRNPLLQ8WVV9 542 aaKnown RBP28.08■■■□□ 2.09
SOX1-201ENST00000330949 JCADQ9P266 1359 aa28.07■■■□□ 2.08
SOX1-201ENST00000330949 NLRP12P59046 1061 aa28.07■■■□□ 2.08
SOX1-201ENST00000330949 FAM177A1Q8N128 213 aaPredicted RBP28.07■■■□□ 2.08
SOX1-201ENST00000330949 NEK1Q96PY6 1258 aa28.07■■■□□ 2.08
SOX1-201ENST00000330949 CHPF2Q9P2E5 772 aa28.07■■■□□ 2.08
SOX1-201ENST00000330949 ATP2B1P20020 1258 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 MTX1Q13505 466 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 LMOD1P29536 600 aaPredicted RBP28.06■■■□□ 2.08
SOX1-201ENST00000330949 Q6ZUG5 572 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 HDXQ7Z353 690 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 AACSQ86V21 672 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 PCDHA7Q9UN72 937 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 LRRC37A3O60309 1634 aa28.06■■■□□ 2.08
SOX1-201ENST00000330949 LMOD2Q6P5Q4 547 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 LRRC59Q96AG4 307 aaKnown RBP28.05■■■□□ 2.08
SOX1-201ENST00000330949 FSD1Q9BTV5 496 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 PDE11AQ9HCR9 933 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 PI4KAP2A4QPH2 592 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 SCRN1Q12765 414 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 PI4KAP1Q8N8J0 262 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 WDR24Q96S15 920 aa28.05■■■□□ 2.08
SOX1-201ENST00000330949 SLC3A2P08195 630 aaKnown RBP28.05■■■□□ 2.08
SOX1-201ENST00000330949 SECISBP2LQ93073 1101 aaKnown RBP28.05■■■□□ 2.08
SOX1-201ENST00000330949 A0A1B0GVL5 298 aa28.04■■■□□ 2.08
SOX1-201ENST00000330949 UBASH3AP57075 661 aa28.04■■■□□ 2.08
SOX1-201ENST00000330949 CORO7P57737 925 aa28.04■■■□□ 2.08
SOX1-201ENST00000330949 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
SOX1-201ENST00000330949 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 NDUFA8P51970 172 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 USPL1Q5W0Q7 1092 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 CHMP4CQ96CF2 233 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 POTEB2H3BUK9 544 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 DRC1Q96MC2 740 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 BABAM1Q9NWV8 329 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 PIK3C2AO00443 1686 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 ABCC6O95255 1503 aa28.03■■■□□ 2.08
SOX1-201ENST00000330949 MCM6Q14566 821 aa28.02■■■□□ 2.08
SOX1-201ENST00000330949 NSUN7Q8NE18 718 aaKnown RBP28.02■■■□□ 2.08
SOX1-201ENST00000330949 PFKFB2O60825 505 aa28.02■■■□□ 2.08
SOX1-201ENST00000330949 ALDH1L1O75891 902 aa28.02■■■□□ 2.08
SOX1-201ENST00000330949 SERPINC1P01008 464 aa28.02■■■□□ 2.08
SOX1-201ENST00000330949 TOP1P11387 765 aaKnown RBP28.02■■■□□ 2.08
SOX1-201ENST00000330949 BEND3Q5T5X7 828 aa28.02■■■□□ 2.08
SOX1-201ENST00000330949 ERLIN1O75477 346 aa28.01■■■□□ 2.08
SOX1-201ENST00000330949 NBPF6Q5VWK0 638 aa28.01■■■□□ 2.08
SOX1-201ENST00000330949 NBPF4Q96M43 638 aa28.01■■■□□ 2.08
SOX1-201ENST00000330949 TOMM22Q9NS69 142 aa28.01■■■□□ 2.08
SOX1-201ENST00000330949 BIN1O00499 593 aa28.01■■■□□ 2.07
SOX1-201ENST00000330949 CFAP100Q494V2 611 aa28.01■■■□□ 2.07
SOX1-201ENST00000330949 VSTM4Q8IW00 320 aa28.01■■■□□ 2.07
SOX1-201ENST00000330949 RTEL1Q9NZ71 1219 aa28.01■■■□□ 2.07
SOX1-201ENST00000330949 FOSBP53539 338 aa28■■■□□ 2.07
SOX1-201ENST00000330949 BEND6Q5SZJ8 279 aaPredicted RBP28■■■□□ 2.07
SOX1-201ENST00000330949 DNAAF4Q8WXU2 420 aa28■■■□□ 2.07
SOX1-201ENST00000330949 KIFC2Q96AC6 838 aa28■■■□□ 2.07
SOX1-201ENST00000330949 TAF5LO75529 589 aa28■■■□□ 2.07
SOX1-201ENST00000330949 ATP1A3P13637 1013 aa28■■■□□ 2.07
SOX1-201ENST00000330949 SUGP1Q8IWZ8 645 aaKnown RBP28■■■□□ 2.07
SOX1-201ENST00000330949 PTPDC1A2A3K4 754 aa28■■■□□ 2.07
SOX1-201ENST00000330949 USP5P45974 858 aa28■■■□□ 2.07
SOX1-201ENST00000330949 ZNF589Q86UQ0 364 aaPredicted RBP28■■■□□ 2.07
SOX1-201ENST00000330949 FMN2Q9NZ56 1722 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 TMEM139Q8IV31 216 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 THEMISQ8N1K5 641 aaPredicted RBP27.99■■■□□ 2.07
SOX1-201ENST00000330949 DHX58Q96C10 678 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 SIL1Q9H173 461 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 NEDD4P46934 1319 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 SF3A1Q15459 793 aaKnown RBP27.99■■■□□ 2.07
SOX1-201ENST00000330949 FOXR1Q6PIV2 292 aa27.99■■■□□ 2.07
SOX1-201ENST00000330949 CHMP4BP1P59074 171 aa27.98■■■□□ 2.07
SOX1-201ENST00000330949 MYO1BO43795 1136 aa27.98■■■□□ 2.07
SOX1-201ENST00000330949 TUBB4BP68371 445 aa27.98■■■□□ 2.07
SOX1-201ENST00000330949 EFCAB13Q8IY85 973 aa27.98■■■□□ 2.07
SOX1-201ENST00000330949 CPP00450 1065 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 HSP90B2PQ58FF3 399 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 KCNG4Q8TDN1 519 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 BAG1Q99933 345 aaPredicted RBP27.97■■■□□ 2.07
SOX1-201ENST00000330949 HSD3B7Q9H2F3 369 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 FAN1Q9Y2M0 1017 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 SRGAP1Q7Z6B7 1085 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 RAB21Q9UL25 225 aa27.97■■■□□ 2.07
SOX1-201ENST00000330949 PA2G4Q9UQ80 394 aaKnown RBP27.97■■■□□ 2.07
SOX1-201ENST00000330949 STX10O60499 249 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 PSEN1P49768 467 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 PRAMEF22A3QJZ6 481 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 ILDR1Q86SU0 546 aaPredicted RBP27.96■■■□□ 2.07
SOX1-201ENST00000330949 FAM71BQ8TC56 605 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 MYL5Q02045 173 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 TEFQ10587 303 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 STK38Q15208 465 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 DPF2Q92785 391 aa27.96■■■□□ 2.07
SOX1-201ENST00000330949 SWT1Q5T5J6 900 aaKnown RBP27.95■■■□□ 2.06
SOX1-201ENST00000330949 CCDC91Q7Z6B0 441 aa27.95■■■□□ 2.06
SOX1-201ENST00000330949 LINC00301Q8NCQ3 95 aa27.95■■■□□ 2.06
SOX1-201ENST00000330949 CCDC12Q8WUD4 166 aaPredicted RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms