RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ECM29Q5VYK3 1845 aa29.45■■■□□ 2.3
TMEM54-201ENST00000329151 COL1A1P02452 1464 aaPredicted RBP29.44■■■□□ 2.3
TMEM54-201ENST00000329151 RBM5P52756 815 aaKnown RBP eCLIP29.44■■■□□ 2.3
TMEM54-201ENST00000329151 SREBF2Q12772 1141 aa29.44■■■□□ 2.3
TMEM54-201ENST00000329151 MKRN3Q13064 507 aaKnown RBP29.43■■■□□ 2.3
TMEM54-201ENST00000329151 ANGEL1Q9UNK9 670 aaKnown RBP29.43■■■□□ 2.3
TMEM54-201ENST00000329151 IL1R1P14778 569 aa29.42■■■□□ 2.3
TMEM54-201ENST00000329151 EPHA10Q5JZY3 1008 aa29.42■■■□□ 2.3
TMEM54-201ENST00000329151 CTU1Q7Z7A3 348 aaKnown RBP29.42■■■□□ 2.3
TMEM54-201ENST00000329151 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.42■■■□□ 2.3
TMEM54-201ENST00000329151 PPP1R12BO60237 982 aaPredicted RBP29.41■■■□□ 2.3
TMEM54-201ENST00000329151 DEFB129Q9H1M3 183 aa29.41■■■□□ 2.3
TMEM54-201ENST00000329151 VEZTQ9HBM0 779 aa29.41■■■□□ 2.3
TMEM54-201ENST00000329151 PPP2R3BQ9Y5P8 575 aa29.41■■■□□ 2.3
TMEM54-201ENST00000329151 FKBP1AP62942 108 aaKnown RBP29.4■■■□□ 2.3
TMEM54-201ENST00000329151 CFAP100Q494V2 611 aa29.4■■■□□ 2.3
TMEM54-201ENST00000329151 JAG2Q9Y219 1238 aa29.4■■■□□ 2.3
TMEM54-201ENST00000329151 RGS19P49795 217 aa29.39■■■□□ 2.3
TMEM54-201ENST00000329151 CERS5Q8N5B7 392 aa29.39■■■□□ 2.3
TMEM54-201ENST00000329151 MTMR14Q8NCE2 650 aa29.39■■■□□ 2.3
TMEM54-201ENST00000329151 ZBED3Q96IU2 234 aaPredicted RBP29.39■■■□□ 2.3
TMEM54-201ENST00000329151 PTPN12Q05209 780 aaKnown RBP29.38■■■□□ 2.29
TMEM54-201ENST00000329151 SUPT20HL1Q3ZLR7 823 aa29.38■■■□□ 2.29
TMEM54-201ENST00000329151 VPS37DQ86XT2 251 aa29.38■■■□□ 2.29
TMEM54-201ENST00000329151 CLRN2A0PK11 232 aa29.37■■■□□ 2.29
TMEM54-201ENST00000329151 TBC1D8O95759 1140 aa29.37■■■□□ 2.29
TMEM54-201ENST00000329151 UBE4AQ14139 1066 aa29.37■■■□□ 2.29
TMEM54-201ENST00000329151 IRS2Q9Y4H2 1338 aa29.37■■■□□ 2.29
TMEM54-201ENST00000329151 HIBADHP31937 336 aaKnown RBP29.36■■■□□ 2.29
TMEM54-201ENST00000329151 SLC10A4Q96EP9 437 aa29.36■■■□□ 2.29
TMEM54-201ENST00000329151 SUCLG2Q96I99 432 aa29.36■■■□□ 2.29
TMEM54-201ENST00000329151 SPDYE2BA6NHP3 402 aa29.35■■■□□ 2.29
TMEM54-201ENST00000329151 SPDYE6P0CI01 402 aa29.35■■■□□ 2.29
TMEM54-201ENST00000329151 TM4SF4P48230 202 aa29.35■■■□□ 2.29
TMEM54-201ENST00000329151 FRAT2O75474 233 aaPredicted RBP29.34■■■□□ 2.29
TMEM54-201ENST00000329151 MFSD14BQ5SR56 506 aa29.34■■■□□ 2.29
TMEM54-201ENST00000329151 MROH5Q6ZUA9 1318 aa29.34■■■□□ 2.29
TMEM54-201ENST00000329151 TNFAIP1Q13829 316 aa29.33■■■□□ 2.29
TMEM54-201ENST00000329151 PKN2Q16513 984 aaKnown RBP29.33■■■□□ 2.29
TMEM54-201ENST00000329151 PTPRCP08575 1304 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 FAM205AQ6ZU69 1335 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 ALDH1A1P00352 501 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 NBPF7P0C2Y1 421 aaPredicted RBP29.32■■■□□ 2.28
TMEM54-201ENST00000329151 GYG1P46976 350 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 IREB2P48200 963 aaKnown RBP29.32■■■□□ 2.28
TMEM54-201ENST00000329151 LDLRAD1Q5T700 205 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 SPRYD7Q5W111 196 aa29.32■■■□□ 2.28
TMEM54-201ENST00000329151 ZNF296Q8WUU4 475 aaPredicted RBP29.32■■■□□ 2.28
TMEM54-201ENST00000329151 TTF2Q9UNY4 1162 aaKnown RBP29.32■■■□□ 2.28
TMEM54-201ENST00000329151 E9PSI1 815 aa29.31■■■□□ 2.28
TMEM54-201ENST00000329151 METTL24Q5JXM2 366 aa29.31■■■□□ 2.28
TMEM54-201ENST00000329151 PRMT6Q96LA8 375 aaPredicted RBP29.31■■■□□ 2.28
TMEM54-201ENST00000329151 BICC1Q9H694 974 aaKnown RBP29.31■■■□□ 2.28
TMEM54-201ENST00000329151 MANSC4A6NHS7 340 aaPredicted RBP29.3■■■□□ 2.28
TMEM54-201ENST00000329151 INHBEP58166 350 aa29.3■■■□□ 2.28
TMEM54-201ENST00000329151 CAVIN4Q5BKX8 364 aa29.3■■■□□ 2.28
TMEM54-201ENST00000329151 TDRD7Q8NHU6 1098 aaKnown RBP29.3■■■□□ 2.28
TMEM54-201ENST00000329151 PUS3Q9BZE2 481 aaKnown RBP29.3■■■□□ 2.28
TMEM54-201ENST00000329151 PCDHAC2Q9Y5I4 1007 aa29.3■■■□□ 2.28
TMEM54-201ENST00000329151 GPR25O00155 361 aa29.29■■■□□ 2.28
TMEM54-201ENST00000329151 SOX10P56693 466 aa29.29■■■□□ 2.28
TMEM54-201ENST00000329151 FZD1Q9UP38 647 aa29.29■■■□□ 2.28
TMEM54-201ENST00000329151 ZBTB48P10074 688 aaPredicted RBP29.28■■■□□ 2.28
TMEM54-201ENST00000329151 MRPL50Q8N5N7 158 aaKnown RBP29.28■■■□□ 2.28
TMEM54-201ENST00000329151 FAM84BQ96KN1 310 aaPredicted RBP29.28■■■□□ 2.28
TMEM54-201ENST00000329151 SERPINA10Q9UK55 444 aa29.28■■■□□ 2.28
TMEM54-201ENST00000329151 PDE4DIPQ5VU43 2346 aa29.28■■■□□ 2.28
TMEM54-201ENST00000329151 ARAP2Q8WZ64 1704 aa29.28■■■□□ 2.28
TMEM54-201ENST00000329151 UTYO14607 1347 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 UNCXA6NJT0 531 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 FKTNO75072 461 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 TNNI2P48788 182 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 RASA3Q14644 834 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 MAP3K11Q16584 847 aa29.27■■■□□ 2.28
TMEM54-201ENST00000329151 ZNF521Q96K83 1311 aa29.26■■■□□ 2.27
TMEM54-201ENST00000329151 CHAF1AQ13111 956 aaPredicted RBP29.26■■■□□ 2.27
TMEM54-201ENST00000329151 NOM1Q5C9Z4 860 aaKnown RBP29.26■■■□□ 2.27
TMEM54-201ENST00000329151 NBPF12Q5TAG4 269 aaPredicted RBP29.26■■■□□ 2.27
TMEM54-201ENST00000329151 OTUD7BQ6GQQ9 843 aa29.26■■■□□ 2.27
TMEM54-201ENST00000329151 RIPOR2Q9Y4F9 1068 aa29.26■■■□□ 2.27
TMEM54-201ENST00000329151 TBC1D22AQ8WUA7 517 aa29.25■■■□□ 2.27
TMEM54-201ENST00000329151 KAZALD1Q96I82 304 aa29.25■■■□□ 2.27
TMEM54-201ENST00000329151 WNK4Q96J92 1243 aa29.25■■■□□ 2.27
TMEM54-201ENST00000329151 HPS5Q9UPZ3 1129 aa29.25■■■□□ 2.27
TMEM54-201ENST00000329151 ANKRD13AQ8IZ07 590 aa29.24■■■□□ 2.27
TMEM54-201ENST00000329151 CLMNQ96JQ2 1002 aa29.24■■■□□ 2.27
TMEM54-201ENST00000329151 ZNF70Q9UC06 446 aaPredicted RBP29.24■■■□□ 2.27
TMEM54-201ENST00000329151 IQSEC3Q9UPP2 1182 aaPredicted RBP29.24■■■□□ 2.27
TMEM54-201ENST00000329151 RABL6Q3YEC7 729 aaPredicted RBP29.23■■■□□ 2.27
TMEM54-201ENST00000329151 SPDYE2Q495Y8 402 aa29.23■■■□□ 2.27
TMEM54-201ENST00000329151 TDRD3Q9H7E2 651 aaKnown RBP29.23■■■□□ 2.27
TMEM54-201ENST00000329151 SSC5DA1L4H1 1573 aa29.22■■■□□ 2.27
TMEM54-201ENST00000329151 CRKP46108 304 aa29.22■■■□□ 2.27
TMEM54-201ENST00000329151 DZIP1LQ8IYY4 767 aaKnown RBP29.22■■■□□ 2.27
TMEM54-201ENST00000329151 SSH1Q8WYL5 1049 aa29.22■■■□□ 2.27
TMEM54-201ENST00000329151 CFHR5Q9BXR6 569 aa29.22■■■□□ 2.27
TMEM54-201ENST00000329151 PDE8BO95263 885 aa29.21■■■□□ 2.27
TMEM54-201ENST00000329151 LRRC24Q50LG9 513 aa29.21■■■□□ 2.27
TMEM54-201ENST00000329151 IFNL1Q8IU54 200 aa29.21■■■□□ 2.27
TMEM54-201ENST00000329151 TMOD2Q9NZR1 351 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms