RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 CERS5Q8N5B7 392 aa22.32■■□□□ 1.16
PTPMT1-201ENST00000326656 COL1A1P02452 1464 aaPredicted RBP22.32■■□□□ 1.16
PTPMT1-201ENST00000326656 FAM205AQ6ZU69 1335 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 UBE2Q2LH0YL09 131 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 PLIN1O60240 522 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 PRAMEF18Q5VWM3 479 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 SUCLG2Q96I99 432 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 PPP2R3BQ9Y5P8 575 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 MROH5Q6ZUA9 1318 aa22.31■■□□□ 1.16
PTPMT1-201ENST00000326656 CCDC85CA6NKD9 419 aa22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 MYO1BO43795 1136 aa22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 TRPA1O75762 1119 aa22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 TTLL12Q14166 644 aaPredicted RBP22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 ARMC9Q7Z3E5 817 aa22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 SCAF8Q9UPN6 1271 aaKnown RBP22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
PTPMT1-201ENST00000326656 ALDH1L2Q3SY69 923 aa22.29■■□□□ 1.16
PTPMT1-201ENST00000326656 TDRD7Q8NHU6 1098 aaKnown RBP22.29■■□□□ 1.16
PTPMT1-201ENST00000326656 MCOLN1Q9GZU1 580 aa22.29■■□□□ 1.16
PTPMT1-201ENST00000326656 DEFB129Q9H1M3 183 aa22.29■■□□□ 1.16
PTPMT1-201ENST00000326656 UNCXA6NJT0 531 aa22.28■■□□□ 1.16
PTPMT1-201ENST00000326656 SLC34A2O95436 690 aa22.28■■□□□ 1.16
PTPMT1-201ENST00000326656 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
PTPMT1-201ENST00000326656 MOB2Q70IA6 237 aa22.28■■□□□ 1.16
PTPMT1-201ENST00000326656 SSH1Q8WYL5 1049 aa22.28■■□□□ 1.16
PTPMT1-201ENST00000326656 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
PTPMT1-201ENST00000326656 DGKZQ13574 1117 aa22.27■■□□□ 1.16
PTPMT1-201ENST00000326656 LDLRAD1Q5T700 205 aa22.27■■□□□ 1.16
PTPMT1-201ENST00000326656 BICC1Q9H694 974 aaKnown RBP22.27■■□□□ 1.16
PTPMT1-201ENST00000326656 SPDYE2BA6NHP3 402 aa22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 SPDYE6P0CI01 402 aa22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 TM4SF4P48230 202 aa22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 CFAP100Q494V2 611 aa22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 FAM84BQ96KN1 310 aaPredicted RBP22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 PUS3Q9BZE2 481 aaKnown RBP22.26■■□□□ 1.15
PTPMT1-201ENST00000326656 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 SUPT20HL1Q3ZLR7 823 aa22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 TRMT2AQ8IZ69 625 aaKnown RBP22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 ANKRD44Q8N8A2 993 aa22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 PRMT6Q96LA8 375 aaPredicted RBP22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 USP44Q9H0E7 712 aa22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 SERPINA10Q9UK55 444 aa22.25■■□□□ 1.15
PTPMT1-201ENST00000326656 PPP1R12BO60237 982 aaPredicted RBP22.24■■□□□ 1.15
PTPMT1-201ENST00000326656 RGS19P49795 217 aa22.24■■□□□ 1.15
PTPMT1-201ENST00000326656 MAP3K11Q16584 847 aa22.24■■□□□ 1.15
PTPMT1-201ENST00000326656 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 PDE8BO95263 885 aa22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 GYG1P46976 350 aa22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 PTPN12Q05209 780 aaKnown RBP22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 SREBF2Q12772 1141 aa22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 NOM1Q5C9Z4 860 aaKnown RBP22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 MFSD14BQ5SR56 506 aa22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 FBXO33Q7Z6M2 555 aa22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 ANGEL1Q9UNK9 670 aaKnown RBP22.23■■□□□ 1.15
PTPMT1-201ENST00000326656 INHBEP58166 350 aa22.22■■□□□ 1.15
PTPMT1-201ENST00000326656 CAVIN4Q5BKX8 364 aa22.22■■□□□ 1.15
PTPMT1-201ENST00000326656 VPS37DQ86XT2 251 aa22.22■■□□□ 1.15
PTPMT1-201ENST00000326656 RBM5P52756 815 aaKnown RBP eCLIP22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 MLLT1Q03111 559 aaPredicted RBP22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 TNFAIP1Q13829 316 aa22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 METTL24Q5JXM2 366 aa22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 TBC1D22AQ8WUA7 517 aa22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
PTPMT1-201ENST00000326656 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 HDLBPQ00341 1268 aaKnown RBP22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 SPRYD7Q5W111 196 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 VGLL2Q8N8G2 317 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 SLC10A4Q96EP9 437 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 CFHR5Q9BXR6 569 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 HDAC5Q9UQL6 1122 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 JAG2Q9Y219 1238 aa22.2■■□□□ 1.14
PTPMT1-201ENST00000326656 PRKG1Q13976 671 aa22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 LRRC24Q50LG9 513 aa22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 CTU1Q7Z7A3 348 aaKnown RBP22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 CDCA7LQ96GN5 454 aa22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 MRIQ9BWK5 157 aa22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 SMC4Q9NTJ3 1288 aa22.19■■□□□ 1.14
PTPMT1-201ENST00000326656 CLRN2A0PK11 232 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 ALDH1A1P00352 501 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 ZBTB48P10074 688 aaPredicted RBP22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 SPDYE2Q495Y8 402 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 VEZTQ9HBM0 779 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 FBXO3Q9UK99 471 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 PCDHAC2Q9Y5I4 1007 aa22.18■■□□□ 1.14
PTPMT1-201ENST00000326656 MANSC4A6NHS7 340 aaPredicted RBP22.17■■□□□ 1.14
PTPMT1-201ENST00000326656 RASA3Q14644 834 aa22.17■■□□□ 1.14
PTPMT1-201ENST00000326656 PKN2Q16513 984 aaKnown RBP22.17■■□□□ 1.14
PTPMT1-201ENST00000326656 SUGT1Q9Y2Z0 365 aa22.17■■□□□ 1.14
PTPMT1-201ENST00000326656 FRAT2O75474 233 aaPredicted RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 IFIT1P09914 478 aaKnown RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 IREB2P48200 963 aaKnown RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 PUM3Q15397 648 aaKnown RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 ZNF70Q9UC06 446 aaPredicted RBP22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 ARAP2Q8WZ64 1704 aa22.16■■□□□ 1.14
PTPMT1-201ENST00000326656 EYA2O00167 538 aa22.15■■□□□ 1.14
PTPMT1-201ENST00000326656 TBC1D8O95759 1140 aa22.15■■□□□ 1.14
PTPMT1-201ENST00000326656 NBPF12Q5TAG4 269 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms