RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 COL6A1P12109 1028 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 FAM43AQ8N2R8 423 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 KMT2BQ9UMN6 2715 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-201ENST00000323959 CETPP11597 493 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 CTGFP29279 349 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 PRKCZQ05513 592 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 COL9A2Q14055 689 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-201ENST00000323959 OPTNQ96CV9 577 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 TCF20Q9UGU0 1960 aaKnown RBP9□□□□□ -0.97
CSTF3-201ENST00000323959 ERC2O15083 957 aa9□□□□□ -0.97
CSTF3-201ENST00000323959 PPM1GO15355 546 aaPredicted RBP9□□□□□ -0.97
CSTF3-201ENST00000323959 CSPP1Q1MSJ5 1256 aa9□□□□□ -0.97
CSTF3-201ENST00000323959 MYO3BQ8WXR4 1341 aa9□□□□□ -0.97
CSTF3-201ENST00000323959 GFRA3O60609 400 aa9□□□□□ -0.97
CSTF3-201ENST00000323959 LGR6Q9HBX8 967 aa9□□□□□ -0.97
CSTF3-201ENST00000323959 PFASO15067 1338 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 ALADP13716 330 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 ZNF576Q9H609 170 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 ZNF804BA4D1E1 1349 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 ZNF316A6NFI3 1004 aaPredicted RBP8.99□□□□□ -0.97
CSTF3-201ENST00000323959 NBPF26B4DH59 902 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 NBPF9Q3BBW0 867 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 IRF2BPLQ9H1B7 796 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 COG5Q9UP83 839 aa8.99□□□□□ -0.97
CSTF3-201ENST00000323959 NTSR2O95665 410 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 PDE3AQ14432 1141 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 ZNF790Q6PG37 636 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 POLKQ9UBT6 870 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 WNT10BO00744 389 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 DDX46Q7L014 1031 aaKnown RBP8.98□□□□□ -0.97
CSTF3-201ENST00000323959 PPP1R42Q7Z4L9 355 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 PPM1EQ8WY54 764 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 KCNQ5Q9NR82 932 aa8.98□□□□□ -0.97
CSTF3-201ENST00000323959 TLL1O43897 1013 aa8.97□□□□□ -0.97
CSTF3-201ENST00000323959 PARP10Q53GL7 1025 aa8.97□□□□□ -0.97
CSTF3-201ENST00000323959 C3orf67Q6ZVT6 689 aa8.97□□□□□ -0.97
CSTF3-201ENST00000323959 DOK7Q18PE1 504 aa8.97□□□□□ -0.97
CSTF3-201ENST00000323959 LRRC26Q2I0M4 334 aa8.97□□□□□ -0.97
CSTF3-201ENST00000323959 ZBED3Q96IU2 234 aaPredicted RBP8.97□□□□□ -0.97
CSTF3-201ENST00000323959 HLFQ16534 295 aa8.96□□□□□ -0.97
CSTF3-201ENST00000323959 HERVK_113Q902F9 699 aa8.96□□□□□ -0.97
CSTF3-201ENST00000323959 TIFAQ96CG3 184 aa8.96□□□□□ -0.97
CSTF3-201ENST00000323959 MFSD14AQ96MC6 490 aa8.96□□□□□ -0.97
CSTF3-201ENST00000323959 CACNA1BQ00975 2339 aa8.96□□□□□ -0.97
CSTF3-201ENST00000323959 RIMBP2O15034 1052 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 USP2O75604 605 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-201ENST00000323959 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-201ENST00000323959 DNAJB2P25686 324 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-201ENST00000323959 ID4P47928 161 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.988e-37■■■■□ 22.1
CSTF3-201ENST00000323959 C9orf50Q5SZB4 431 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 ANKRD23Q86SG2 305 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
CSTF3-201ENST00000323959 ZBTB38Q8NAP3 1195 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-201ENST00000323959 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-201ENST00000323959 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-201ENST00000323959 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 BTBD19C9JJ37 291 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 G3V3G9 751 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 UIMC1Q96RL1 719 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 ZC3H12CQ9C0D7 883 aaKnown RBP8.95□□□□□ -0.98
CSTF3-201ENST00000323959 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 DEFB129Q9H1M3 183 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-201ENST00000323959 GABRQQ9UN88 632 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 ATRNL1Q5VV63 1379 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 HMGCRP04035 888 aa8.95□□□□□ -0.98
CSTF3-201ENST00000323959 KHSRPQ92945 711 aaKnown RBP eCLIP8.95□□□□□ -0.989e-7■■■□□ 16.7
CSTF3-201ENST00000323959 SCAF8Q9UPN6 1271 aaKnown RBP8.95□□□□□ -0.98
CSTF3-201ENST00000323959 SNAPC2Q13487 334 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 PKN1Q16512 942 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 SUSD4Q5VX71 490 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 POLLQ9UGP5 575 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 CPA4Q9UI42 421 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 MAP3K15Q6ZN16 1313 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 SPDYE5A6NIY4 337 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 BCRP11274 1271 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 ELNP15502 786 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 FLT3LGP49771 235 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 KCNQ1P51787 676 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 ZNF34Q8IZ26 560 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
CSTF3-201ENST00000323959 TBC1D16Q8TBP0 767 aa8.93□□□□□ -0.98
CSTF3-201ENST00000323959 RNPC3Q96LT9 517 aaKnown RBP8.93□□□□□ -0.98
CSTF3-201ENST00000323959 PODXL2Q9NZ53 605 aa8.93□□□□□ -0.98
CSTF3-201ENST00000323959 A0A0G2JMZ2 1700 aa8.93□□□□□ -0.98
CSTF3-201ENST00000323959 UBN2Q6ZU65 1347 aa8.93□□□□□ -0.98
CSTF3-201ENST00000323959 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
CSTF3-201ENST00000323959 LAMA2P24043 3122 aaKnown RBP8.92□□□□□ -0.98
CSTF3-201ENST00000323959 PODNQ7Z5L7 613 aa8.92□□□□□ -0.98
CSTF3-201ENST00000323959 GPSM2P81274 684 aa8.92□□□□□ -0.98
CSTF3-201ENST00000323959 AMER1Q5JTC6 1135 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-201ENST00000323959 AEBP1Q8IUX7 1158 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms