RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 PPP2R5AQ15172 486 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ITGB1BP2Q9UKP3 347 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 MYO10Q9HD67 2058 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 CEP85LQ5SZL2 805 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ATRIPQ8WXE1 791 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 TSGA10Q9BZW7 698 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 COPG1Q9Y678 874 aaKnown RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 KDM5AP29375 1690 aaKnown RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 POLR3DP05423 398 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 HEATR3Q7Z4Q2 680 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 HLA-DOAP06340 250 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 AFAP1Q8N556 730 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 PEG3Q9GZU2 1588 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ARHGEF12Q9NZN5 1544 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 DRC3Q9H069 523 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 NDC80O14777 642 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 UBA7P41226 1012 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 PLCB4Q15147 1175 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 KIAA0753Q2KHM9 967 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 MSANTD4Q8NCY6 345 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 LMNB2Q03252 620 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 HAUS8Q9BT25 410 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ECHDC1Q9NTX5 307 aa10.94□□□□□ -0.66
COL12A1-201ENST00000322507 ZRANB2O95218 330 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 IRX1P78414 480 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-201ENST00000322507 KRT7P08729 469 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 MTIF2P46199 727 aaKnown RBP10.93□□□□□ -0.66
COL12A1-201ENST00000322507 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
COL12A1-201ENST00000322507 SSX2IPQ9Y2D8 614 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 NCOA7Q8NI08 942 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 GSDMBQ8TAX9 411 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 H0YC42 278 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 CENPKQ9BS16 269 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 PPFIA1Q13136 1202 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 BICDL1Q6ZP65 573 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 ARMCX6Q7L4S7 300 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 GNAT2P19087 354 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 AK9Q5TCS8 1911 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL12A1-201ENST00000322507 SELENOSQ9BQE4 189 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 PSMD6Q15008 389 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 KRT83P78385 493 aa10.93□□□□□ -0.66
COL12A1-201ENST00000322507 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.93□□□□□ -0.66
COL12A1-201ENST00000322507 TBC1D31Q96DN5 1066 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 ZNF165P49910 485 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 URI1O94763 535 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 CALML3P27482 149 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 UTP14CQ5TAP6 766 aaKnown RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 APBB1IPQ7Z5R6 666 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 GON4LQ3T8J9 2241 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 CALM1P0DP23 149 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 CALM2P0DP24 149 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 CALM3P0DP25 149 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 TBCAO75347 108 aaKnown RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 ATICP31939 592 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 YY1AP1Q9H869 796 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 INPP1P49441 399 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
COL12A1-201ENST00000322507 EXOC1Q9NV70 894 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
COL12A1-201ENST00000322507 MUM1Q2TAK8 710 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 CACTINQ8WUQ7 758 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 EPSTI1Q96J88 318 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 ABCF2Q9UG63 623 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 NUTM2GQ5VZR2 741 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 AFAP1L1Q8TED9 768 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 TDRD12Q587J7 1177 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 KCNA4P22459 653 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 SATB1Q01826 763 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 ZCRB1Q8TBF4 217 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 SDCCAG8Q86SQ7 713 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 HDAC9Q9UKV0 1011 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 PRPF40BQ6NWY9 871 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 RPGRQ92834 1020 aaKnown RBP10.91□□□□□ -0.66
COL12A1-201ENST00000322507 HIP1RO75146 1068 aa10.91□□□□□ -0.66
COL12A1-201ENST00000322507 CTAGE15A4D2H0 777 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms