RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 GNAI3P08754 354 aa20.06■□□□□ 0.8
HDDC2-201ENST00000318787 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
HDDC2-201ENST00000318787 VEGFBP49765 207 aa20.06■□□□□ 0.8
HDDC2-201ENST00000318787 FTSJ3Q8IY81 847 aaKnown RBP20.06■□□□□ 0.8
HDDC2-201ENST00000318787 PDE8BO95263 885 aa20.05■□□□□ 0.8
HDDC2-201ENST00000318787 IL1R1P14778 569 aa20.05■□□□□ 0.8
HDDC2-201ENST00000318787 IFFO2Q5TF58 517 aa20.05■□□□□ 0.8
HDDC2-201ENST00000318787 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
HDDC2-201ENST00000318787 ECM29Q5VYK3 1845 aa20.04■□□□□ 0.8
HDDC2-201ENST00000318787 EYA2O00167 538 aa20.04■□□□□ 0.8
HDDC2-201ENST00000318787 RFX5P48382 616 aaPredicted RBP20.04■□□□□ 0.8
HDDC2-201ENST00000318787 PTPN12Q05209 780 aaKnown RBP20.04■□□□□ 0.8
HDDC2-201ENST00000318787 NBPF9Q3BBW0 867 aa20.04■□□□□ 0.8
HDDC2-201ENST00000318787 CAVIN4Q5BKX8 364 aa20.04■□□□□ 0.8
HDDC2-201ENST00000318787 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
HDDC2-201ENST00000318787 PA2G4Q9UQ80 394 aaKnown RBP20.04■□□□□ 0.8
HDDC2-201ENST00000318787 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
HDDC2-201ENST00000318787 HSPA1AP0DMV8 641 aaKnown RBP20.03■□□□□ 0.8
HDDC2-201ENST00000318787 HSPA1BP0DMV9 641 aaKnown RBP20.03■□□□□ 0.8
HDDC2-201ENST00000318787 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
HDDC2-201ENST00000318787 CYP4F22Q6NT55 531 aa20.03■□□□□ 0.8
HDDC2-201ENST00000318787 CERS5Q8N5B7 392 aa20.03■□□□□ 0.8
HDDC2-201ENST00000318787 FAM84BQ96KN1 310 aaPredicted RBP20.03■□□□□ 0.8
HDDC2-201ENST00000318787 PUM3Q15397 648 aaKnown RBP20.02■□□□□ 0.8
HDDC2-201ENST00000318787 TLL2Q9Y6L7 1015 aa20.02■□□□□ 0.8
HDDC2-201ENST00000318787 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
HDDC2-201ENST00000318787 IFIT1P09914 478 aaKnown RBP20.01■□□□□ 0.79
HDDC2-201ENST00000318787 RBM5P52756 815 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDDC2-201ENST00000318787 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
HDDC2-201ENST00000318787 VGLL2Q8N8G2 317 aa20.01■□□□□ 0.79
HDDC2-201ENST00000318787 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
HDDC2-201ENST00000318787 WNT10BO00744 389 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 SLC5A1P13866 664 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 DLGAP5Q15398 846 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 MFSD14BQ5SR56 506 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 TDRD7Q8NHU6 1098 aaKnown RBP20■□□□□ 0.79
HDDC2-201ENST00000318787 CDCA5Q96FF9 252 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 CAPNS2Q96L46 248 aa20■□□□□ 0.79
HDDC2-201ENST00000318787 GNAI2P04899 355 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 BCAMP50895 628 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 COL13A1Q5TAT6 717 aaPredicted RBP19.99■□□□□ 0.79
HDDC2-201ENST00000318787 ATG9AQ7Z3C6 839 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 SAPCD2Q86UD0 394 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 DZIP1LQ8IYY4 767 aaKnown RBP19.99■□□□□ 0.79
HDDC2-201ENST00000318787 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 GBA2Q9HCG7 927 aaPredicted RBP19.99■□□□□ 0.79
HDDC2-201ENST00000318787 CEP126Q9P2H0 1117 aa19.99■□□□□ 0.79
HDDC2-201ENST00000318787 ECE1P42892 770 aa19.98■□□□□ 0.79
HDDC2-201ENST00000318787 HUNKP57058 714 aa19.98■□□□□ 0.79
HDDC2-201ENST00000318787 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
HDDC2-201ENST00000318787 PCDHAC2Q9Y5I4 1007 aa19.98■□□□□ 0.79
HDDC2-201ENST00000318787 ATP2B3Q16720 1220 aa19.97■□□□□ 0.79
HDDC2-201ENST00000318787 CFAP100Q494V2 611 aa19.97■□□□□ 0.79
HDDC2-201ENST00000318787 LPIN2Q92539 896 aa19.97■□□□□ 0.79
HDDC2-201ENST00000318787 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
HDDC2-201ENST00000318787 TTF2Q9UNY4 1162 aaKnown RBP19.97■□□□□ 0.79
HDDC2-201ENST00000318787 PITPNM2Q9BZ72 1349 aa19.97■□□□□ 0.79
HDDC2-201ENST00000318787 CIAO1O76071 339 aa19.96■□□□□ 0.79
HDDC2-201ENST00000318787 IL15P40933 162 aaPredicted RBP19.96■□□□□ 0.79
HDDC2-201ENST00000318787 FBXO33Q7Z6M2 555 aa19.96■□□□□ 0.79
HDDC2-201ENST00000318787 AIDAQ96BJ3 306 aa19.96■□□□□ 0.79
HDDC2-201ENST00000318787 FAM205AQ6ZU69 1335 aa19.96■□□□□ 0.79
HDDC2-201ENST00000318787 CLRN2A0PK11 232 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 MYO1BO43795 1136 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 AOC2O75106 756 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 RLBP1P12271 317 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 FGFR2P21802 821 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 FKBP1AP62942 108 aaKnown RBP19.95■□□□□ 0.79
HDDC2-201ENST00000318787 TTLL12Q14166 644 aaPredicted RBP19.95■□□□□ 0.79
HDDC2-201ENST00000318787 VEZTQ9HBM0 779 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 FBXO3Q9UK99 471 aa19.95■□□□□ 0.79
HDDC2-201ENST00000318787 MMP14P50281 582 aa19.95■□□□□ 0.78
HDDC2-201ENST00000318787 APOBEC3FQ8IUX4 373 aaKnown RBP19.95■□□□□ 0.78
HDDC2-201ENST00000318787 COPRSQ9NQ92 184 aa19.95■□□□□ 0.78
HDDC2-201ENST00000318787 PNMA6EA0A0J9YXQ4 647 aa19.94■□□□□ 0.78
HDDC2-201ENST00000318787 PANK1Q8TE04 598 aa19.94■□□□□ 0.78
HDDC2-201ENST00000318787 PAPPA2Q9BXP8 1791 aa19.93■□□□□ 0.78
HDDC2-201ENST00000318787 THSD7BQ9C0I4 1608 aa19.93■□□□□ 0.78
HDDC2-201ENST00000318787 NF2P35240 595 aa19.93■□□□□ 0.78
HDDC2-201ENST00000318787 PRKG1Q13976 671 aa19.93■□□□□ 0.78
HDDC2-201ENST00000318787 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.93■□□□□ 0.78
HDDC2-201ENST00000318787 TFCP2Q12800 502 aa19.92■□□□□ 0.78
HDDC2-201ENST00000318787 MTX1Q13505 466 aa19.92■□□□□ 0.78
HDDC2-201ENST00000318787 GRIK5Q16478 980 aa19.92■□□□□ 0.78
HDDC2-201ENST00000318787 TBC1D22AQ8WUA7 517 aa19.92■□□□□ 0.78
HDDC2-201ENST00000318787 PRMT6Q96LA8 375 aaPredicted RBP19.92■□□□□ 0.78
HDDC2-201ENST00000318787 SPDYE2BA6NHP3 402 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 FOXN1O15353 648 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 SPDYE6P0CI01 402 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 ZNF157P51786 506 aaPredicted RBP19.91■□□□□ 0.78
HDDC2-201ENST00000318787 G3BP1Q13283 466 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDDC2-201ENST00000318787 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
HDDC2-201ENST00000318787 RGMBQ6NW40 437 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 MOB2Q70IA6 237 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 NEUROD6Q96NK8 337 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 BEGAINQ9BUH8 593 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 GNL3LQ9NVN8 582 aaKnown RBP19.91■□□□□ 0.78
HDDC2-201ENST00000318787 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
HDDC2-201ENST00000318787 ADORA1P30542 326 aa19.9■□□□□ 0.78
HDDC2-201ENST00000318787 CRKP46108 304 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms