RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 HHIPL1Q96JK4 782 aa18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 PA2G4Q9UQ80 394 aaKnown RBP18.28■□□□□ 0.52
PPP1CA-201ENST00000312989 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
PPP1CA-201ENST00000312989 IPO8O15397 1037 aaKnown RBP18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 CIAO1O76071 339 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 RLBP1P12271 317 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 MMP14P50281 582 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 GRIK5Q16478 980 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 ZKSCAN2Q63HK3 967 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 CDCA5Q96FF9 252 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 FBXO3Q9UK99 471 aa18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.51
PPP1CA-201ENST00000312989 MTMR14Q8NCE2 650 aa18.26■□□□□ 0.51
PPP1CA-201ENST00000312989 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
PPP1CA-201ENST00000312989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
PPP1CA-201ENST00000312989 BCAMP50895 628 aa18.25■□□□□ 0.51
PPP1CA-201ENST00000312989 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
PPP1CA-201ENST00000312989 SULF1Q8IWU6 871 aa18.25■□□□□ 0.51
PPP1CA-201ENST00000312989 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
PPP1CA-201ENST00000312989 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
PPP1CA-201ENST00000312989 GNAI3P08754 354 aa18.24■□□□□ 0.51
PPP1CA-201ENST00000312989 SIL1Q9H173 461 aa18.24■□□□□ 0.51
PPP1CA-201ENST00000312989 WBP1LQ9NX94 342 aa18.24■□□□□ 0.51
PPP1CA-201ENST00000312989 ARAP2Q8WZ64 1704 aa18.23■□□□□ 0.51
PPP1CA-201ENST00000312989 GBA2Q9HCG7 927 aaPredicted RBP18.23■□□□□ 0.51
PPP1CA-201ENST00000312989 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
PPP1CA-201ENST00000312989 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 FAM155AB1AL88 458 aaPredicted RBP18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 F8W031 263 aaPredicted RBP18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 FOXN1O15353 648 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 MFSD14BQ5SR56 506 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 LPIN2Q92539 896 aa18.22■□□□□ 0.51
PPP1CA-201ENST00000312989 AOC2O75106 756 aa18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 IL15P40933 162 aaPredicted RBP18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 CFAP100Q494V2 611 aa18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 COL13A1Q5TAT6 717 aaPredicted RBP18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 PRMT6Q96LA8 375 aaPredicted RBP18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 HDAC9Q9UKV0 1011 aa18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
PPP1CA-201ENST00000312989 ZBTB22O15209 634 aa18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 GNAI2P04899 355 aa18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 HUNKP57058 714 aa18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 HDAC5Q9UQL6 1122 aa18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 POLR2AP24928 1970 aaKnown RBP18.2■□□□□ 0.5
PPP1CA-201ENST00000312989 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
PPP1CA-201ENST00000312989 IFIT1P09914 478 aaKnown RBP18.19■□□□□ 0.5
PPP1CA-201ENST00000312989 ECE1P42892 770 aa18.19■□□□□ 0.5
PPP1CA-201ENST00000312989 MOB2Q70IA6 237 aa18.19■□□□□ 0.5
PPP1CA-201ENST00000312989 PAPPA2Q9BXP8 1791 aa18.19■□□□□ 0.5
PPP1CA-201ENST00000312989 ADORA1P30542 326 aa18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 POLA2Q14181 598 aa18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 DLGAP5Q15398 846 aa18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 ATP2B3Q16720 1220 aa18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 DZIP1LQ8IYY4 767 aaKnown RBP18.18■□□□□ 0.5
PPP1CA-201ENST00000312989 SLC5A1P13866 664 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 SERPINA10Q9UK55 444 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 MAP2K2P36507 400 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 PHKA1P46020 1223 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 FKBP1BP68106 108 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 CHAF1AQ13111 956 aaPredicted RBP18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 RGMBQ6NW40 437 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 APOBEC3FQ8IUX4 373 aaKnown RBP18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 C2orf69Q8N8R5 385 aa18.17■□□□□ 0.5
PPP1CA-201ENST00000312989 SLC10A3P09131 477 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 TFCP2Q12800 502 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 GRM1Q13255 1194 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 SPDYE2Q495Y8 402 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 PAXIP1Q6ZW49 1069 aaPredicted RBP18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 VPS37DQ86XT2 251 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 C1orf115Q9H7X2 142 aa18.16■□□□□ 0.5
PPP1CA-201ENST00000312989 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
PPP1CA-201ENST00000312989 CRKP46108 304 aa18.15■□□□□ 0.5
PPP1CA-201ENST00000312989 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
PPP1CA-201ENST00000312989 TBC1D22AQ8WUA7 517 aa18.15■□□□□ 0.5
PPP1CA-201ENST00000312989 DEFB129Q9H1M3 183 aa18.15■□□□□ 0.5
PPP1CA-201ENST00000312989 TIMM10P62072 90 aa18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 HDLBPQ00341 1268 aaKnown RBP18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 CCDC102BQ68D86 513 aa18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 RASAL3Q86YV0 1011 aa18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 CDAN1Q8IWY9 1227 aa18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 FZD1Q9UP38 647 aa18.14■□□□□ 0.49
PPP1CA-201ENST00000312989 A0A1B0GUL7 405 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 NOGQ13253 232 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 APOBEC3HQ6NTF7 200 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms