RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 KIF23Q02241 960 aaPredicted RBP10.33□□□□□ -0.76
TPM3-203ENST00000312970 NBPF9Q3BBW0 867 aa10.33□□□□□ -0.76
TPM3-203ENST00000312970 MXD3Q9BW11 206 aa10.33□□□□□ -0.76
TPM3-203ENST00000312970 C9orf78Q9NZ63 289 aaPredicted RBP10.33□□□□□ -0.76
TPM3-203ENST00000312970 SPEF2Q9C093 1822 aa10.33□□□□□ -0.76
TPM3-203ENST00000312970 WNT10BO00744 389 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 TAF5LO75529 589 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 GTF2IP78347 998 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 PRPF38BQ5VTL8 546 aaKnown RBP10.32□□□□□ -0.76
TPM3-203ENST00000312970 LMBR1LQ6UX01 489 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
TPM3-203ENST00000312970 REM2Q8IYK8 340 aaPredicted RBP10.32□□□□□ -0.76
TPM3-203ENST00000312970 MIER1Q8N108 512 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 HELBQ8NG08 1087 aaPredicted RBP10.32□□□□□ -0.76
TPM3-203ENST00000312970 CD209Q9NNX6 404 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 HDAC9Q9UKV0 1011 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 CENPFP49454 3210 aa10.32□□□□□ -0.76
TPM3-203ENST00000312970 GRM8O00222 908 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 ALDH1L1O75891 902 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 SLC10A3P09131 477 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 KLRK1P26718 216 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 SLC4A10Q6U841 1118 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 KIAA0825Q8IV33 1275 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 SRCIN1Q9C0H9 1055 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 SAGE1Q9NXZ1 904 aa10.31□□□□□ -0.76
TPM3-203ENST00000312970 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
TPM3-203ENST00000312970 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 SZT2Q5T011 3432 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 SNAP23O00161 211 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 PLIN1O60240 522 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 TRPA1O75762 1119 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 NF2P35240 595 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 EPHA10Q5JZY3 1008 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 PRAMEF18Q5VWM3 479 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 ZNF804AQ7Z570 1209 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 RNF186Q9NXI6 227 aa10.3□□□□□ -0.76
TPM3-203ENST00000312970 ZNF646O15015 1829 aaPredicted RBP10.3□□□□□ -0.76
TPM3-203ENST00000312970 UBE2Q2LH0YL09 131 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 IL1R1P14778 569 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
TPM3-203ENST00000312970 DLGAP5Q15398 846 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 MOB2Q70IA6 237 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
TPM3-203ENST00000312970 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
TPM3-203ENST00000312970 CNNM1Q9NRU3 951 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 ZNF521Q96K83 1311 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
TPM3-203ENST00000312970 SASH1O94885 1247 aa10.28□□□□□ -0.76
TPM3-203ENST00000312970 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
TPM3-203ENST00000312970 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
TPM3-203ENST00000312970 APOBEC3FQ8IUX4 373 aaKnown RBP10.28□□□□□ -0.76
TPM3-203ENST00000312970 MTMR14Q8NCE2 650 aa10.28□□□□□ -0.76
TPM3-203ENST00000312970 BRCA2P51587 3418 aa10.28□□□□□ -0.76
TPM3-203ENST00000312970 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
TPM3-203ENST00000312970 UBE4AQ14139 1066 aa10.27□□□□□ -0.77
TPM3-203ENST00000312970 ARMC9Q7Z3E5 817 aa10.27□□□□□ -0.77
TPM3-203ENST00000312970 CERS5Q8N5B7 392 aa10.27□□□□□ -0.77
TPM3-203ENST00000312970 MRPL50Q8N5N7 158 aaKnown RBP10.27□□□□□ -0.77
TPM3-203ENST00000312970 SUCLG2Q96I99 432 aa10.27□□□□□ -0.77
TPM3-203ENST00000312970 UTYO14607 1347 aa10.27□□□□□ -0.77
TPM3-203ENST00000312970 A0A0C4DFX4 3053 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 HTTP42858 3142 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 E9PSI1 815 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 MYO1BO43795 1136 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 HIBADHP31937 336 aaKnown RBP10.26□□□□□ -0.77
TPM3-203ENST00000312970 TM4SF4P48230 202 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
TPM3-203ENST00000312970 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
TPM3-203ENST00000312970 KAZALD1Q96I82 304 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 DEFB129Q9H1M3 183 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 PTPRCP08575 1304 aa10.26□□□□□ -0.77
TPM3-203ENST00000312970 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
TPM3-203ENST00000312970 PRKG1Q13976 671 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 LDLRAD1Q5T700 205 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 CTU1Q7Z7A3 348 aaKnown RBP10.25□□□□□ -0.77
TPM3-203ENST00000312970 FAM84BQ96KN1 310 aaPredicted RBP10.25□□□□□ -0.77
TPM3-203ENST00000312970 PRMT6Q96LA8 375 aaPredicted RBP10.25□□□□□ -0.77
TPM3-203ENST00000312970 PUS3Q9BZE2 481 aaKnown RBP10.25□□□□□ -0.77
TPM3-203ENST00000312970 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 RIPOR2Q9Y4F9 1068 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 PPP2R3BQ9Y5P8 575 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 FAM205AQ6ZU69 1335 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 MROH5Q6ZUA9 1318 aa10.25□□□□□ -0.77
TPM3-203ENST00000312970 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 PPP1R12BO60237 982 aaPredicted RBP10.24□□□□□ -0.77
TPM3-203ENST00000312970 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 GYG1P46976 350 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.77
TPM3-203ENST00000312970 SLFN5Q08AF3 891 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 POLA2Q14181 598 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 RABL6Q3YEC7 729 aaPredicted RBP10.24□□□□□ -0.77
TPM3-203ENST00000312970 SUPT20HL1Q3ZLR7 823 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 SSH1Q8WYL5 1049 aa10.24□□□□□ -0.77
TPM3-203ENST00000312970 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms