RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MCM7P33993 719 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 KIF5AQ12840 1032 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 LZTFL1Q9NQ48 299 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 ATP2C2O75185 946 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
PRKCB-201ENST00000303531 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.122e-8■■□□□ 13.7
PRKCB-201ENST00000303531 IKBKGQ9Y6K9 419 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 CCDC42Q96M95 316 aa15.81■□□□□ 0.12
PRKCB-201ENST00000303531 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
PRKCB-201ENST00000303531 MCM9Q9NXL9 1143 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 CAPZA3Q96KX2 299 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 GUCA1BQ9UMX6 200 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
PRKCB-201ENST00000303531 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 USP37Q86T82 979 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 TIGD1Q96MW7 591 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 KRT79Q5XKE5 535 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 ZNF804AQ7Z570 1209 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 SMARCC2Q8TAQ2 1214 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
PRKCB-201ENST00000303531 A0A1W2PRG0 241 aa15.8■□□□□ 0.12
PRKCB-201ENST00000303531 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
PRKCB-201ENST00000303531 BICDL2A1A5D9 508 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 G2E3Q7L622 706 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 WDHD1O75717 1129 aaPredicted RBP15.79■□□□□ 0.12
PRKCB-201ENST00000303531 RASAL2Q9UJF2 1139 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 A0A1B0GVL5 298 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 TRAF1Q13077 416 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 RGS22Q8NE09 1264 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 MRVI1Q9Y6F6 885 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 SYNCQ9H7C4 482 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 RSPH14Q9UHP6 348 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 CABLES1Q8TDN4 633 aa15.79■□□□□ 0.12
PRKCB-201ENST00000303531 TNNI2P48788 182 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 ZNF569Q5MCW4 686 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 PER1O15534 1290 aaPredicted RBP15.78■□□□□ 0.12
PRKCB-201ENST00000303531 OPA1O60313 960 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 HELLSQ9NRZ9 838 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 IL2RBP14784 551 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 ZNF518AQ6AHZ1 1483 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
PRKCB-201ENST00000303531 PRPHP41219 470 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
PRKCB-201ENST00000303531 NEK11Q8NG66 645 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 FERMT1Q9BQL6 677 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 ZKSCAN3Q9BRR0 538 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 TCOF1Q13428 1488 aaKnown RBP15.77■□□□□ 0.12
PRKCB-201ENST00000303531 DDX12PQ92771 950 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 PLIN2Q99541 437 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 PHACTR2O75167 634 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 HOXC9P31274 260 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 DTHD1Q6ZMT9 781 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 IVLP07476 585 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 PPP1R14CQ8TAE6 165 aa15.77■□□□□ 0.12
PRKCB-201ENST00000303531 CCDC129Q6ZRS4 1044 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 ATRIPQ8WXE1 791 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 DCAF5Q96JK2 942 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 FAM160A1Q05DH4 1040 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 ATL3Q6DD88 541 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 IQUBQ8NA54 791 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 ELP1O95163 1332 aa15.77■□□□□ 0.11
PRKCB-201ENST00000303531 ASXL2Q76L83 1435 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
PRKCB-201ENST00000303531 PAIP2Q9BPZ3 127 aaKnown RBP15.76■□□□□ 0.11
PRKCB-201ENST00000303531 RBSNQ9H1K0 784 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 SPDYE3A6NKU9 549 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 MYL5Q02045 173 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 ZBTB9Q96C00 473 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 HSPA4P34932 840 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 COMMD10Q9Y6G5 202 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 NCKAP5LQ9HCH0 1330 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 COL17A1Q9UMD9 1497 aaPredicted RBP15.76■□□□□ 0.11
PRKCB-201ENST00000303531 RHOXF2BP0C7M4 288 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 LUC7L2Q9Y383 392 aaKnown RBP15.76■□□□□ 0.11
PRKCB-201ENST00000303531 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 TMEM110-MUSTN1A8MSY1 372 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 MNAT1P51948 309 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
PRKCB-201ENST00000303531 SLC27A2O14975 620 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 MBD4O95243 580 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 NSRP1Q9H0G5 558 aaKnown RBP15.75■□□□□ 0.11
PRKCB-201ENST00000303531 CAPN2P17655 700 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 GNA11P29992 359 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 DDX21Q9NR30 783 aaKnown RBP eCLIP15.75■□□□□ 0.11
PRKCB-201ENST00000303531 VWA3AA6NCI4 1184 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 DDB1Q16531 1140 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 C6orf163Q5TEZ5 329 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 FAM13AO94988 1023 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 GJC1P36383 396 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 TSNARE1Q96NA8 513 aa15.75■□□□□ 0.11
PRKCB-201ENST00000303531 MPHOSPH6Q99547 160 aaKnown RBP15.75■□□□□ 0.11
PRKCB-201ENST00000303531 RBM28Q9NW13 759 aaKnown RBP15.75■□□□□ 0.11
PRKCB-201ENST00000303531 BAG1Q99933 345 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms