RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MYH13Q9UKX3 1938 aa29.98■■■□□ 2.39
HOXC9-201ENST00000303450 YY1P25490 414 aa29.97■■■□□ 2.39
HOXC9-201ENST00000303450 FAM205AQ6ZU69 1335 aa29.97■■■□□ 2.39
HOXC9-201ENST00000303450 ARID4AP29374 1257 aaPredicted RBP29.96■■■□□ 2.39
HOXC9-201ENST00000303450 NUCB1Q02818 461 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 DACT2Q5SW24 774 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 PPP4R2Q9NY27 417 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 KDM2BQ8NHM5 1336 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 RASGRF1Q13972 1273 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 RSBN1LQ6PCB5 846 aaPredicted RBP29.96■■■□□ 2.39
HOXC9-201ENST00000303450 CHD1LQ86WJ1 897 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 LNPKQ9C0E8 428 aa29.96■■■□□ 2.39
HOXC9-201ENST00000303450 C16orf71Q8IYS4 520 aaPredicted RBP29.95■■■□□ 2.38
HOXC9-201ENST00000303450 ZNF512BQ96KM6 892 aaPredicted RBP29.95■■■□□ 2.38
HOXC9-201ENST00000303450 ZBTB12Q9Y330 459 aaPredicted RBP29.95■■■□□ 2.38
HOXC9-201ENST00000303450 ZBTB22O15209 634 aa29.94■■■□□ 2.38
HOXC9-201ENST00000303450 CENPQQ7L2Z9 268 aaPredicted RBP29.94■■■□□ 2.38
HOXC9-201ENST00000303450 MXD3Q9BW11 206 aa29.94■■■□□ 2.38
HOXC9-201ENST00000303450 ZNF526Q8TF50 670 aaPredicted RBP29.93■■■□□ 2.38
HOXC9-201ENST00000303450 TBC1D22AQ8WUA7 517 aa29.93■■■□□ 2.38
HOXC9-201ENST00000303450 GPATCH3Q96I76 525 aa29.93■■■□□ 2.38
HOXC9-201ENST00000303450 MYO3BQ8WXR4 1341 aa29.93■■■□□ 2.38
HOXC9-201ENST00000303450 RPS12P25398 132 aaKnown RBP29.92■■■□□ 2.38
HOXC9-201ENST00000303450 MCAMP43121 646 aa29.92■■■□□ 2.38
HOXC9-201ENST00000303450 GMPSP49915 693 aaPredicted RBP29.92■■■□□ 2.38
HOXC9-201ENST00000303450 MFSD14BQ5SR56 506 aa29.92■■■□□ 2.38
HOXC9-201ENST00000303450 SPATA5Q8NB90 893 aa29.92■■■□□ 2.38
HOXC9-201ENST00000303450 WDR66Q8TBY9 1149 aa29.92■■■□□ 2.38
HOXC9-201ENST00000303450 HMG20BQ9P0W2 317 aa29.92■■■□□ 2.38
HOXC9-201ENST00000303450 COL1A1P02452 1464 aaPredicted RBP29.92■■■□□ 2.38
HOXC9-201ENST00000303450 SCARF1Q14162 830 aa29.91■■■□□ 2.38
HOXC9-201ENST00000303450 AGBL3Q8NEM8 1001 aa29.91■■■□□ 2.38
HOXC9-201ENST00000303450 FKBP1AP62942 108 aaKnown RBP29.91■■■□□ 2.38
HOXC9-201ENST00000303450 L3MBTL3Q96JM7 780 aaPredicted RBP29.91■■■□□ 2.38
HOXC9-201ENST00000303450 ECHDC1Q9NTX5 307 aa29.91■■■□□ 2.38
HOXC9-201ENST00000303450 ZNF646O15015 1829 aaPredicted RBP29.91■■■□□ 2.38
HOXC9-201ENST00000303450 PDS5AQ29RF7 1337 aaKnown RBP29.9■■■□□ 2.38
HOXC9-201ENST00000303450 PI16Q6UXB8 463 aa29.9■■■□□ 2.38
HOXC9-201ENST00000303450 OTUD7AQ8TE49 926 aaPredicted RBP29.9■■■□□ 2.38
HOXC9-201ENST00000303450 SNRKQ9NRH2 765 aa29.9■■■□□ 2.38
HOXC9-201ENST00000303450 LMOD1P29536 600 aaPredicted RBP29.89■■■□□ 2.38
HOXC9-201ENST00000303450 CERS5Q8N5B7 392 aa29.89■■■□□ 2.38
HOXC9-201ENST00000303450 DPF2Q92785 391 aa29.89■■■□□ 2.38
HOXC9-201ENST00000303450 GMLQ99445 158 aa29.88■■■□□ 2.37
HOXC9-201ENST00000303450 ATP5JP18859 108 aa29.87■■■□□ 2.37
HOXC9-201ENST00000303450 MX1P20591 662 aa29.87■■■□□ 2.37
HOXC9-201ENST00000303450 SCNN1DP51172 638 aa29.87■■■□□ 2.37
HOXC9-201ENST00000303450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.87■■■□□ 2.37
HOXC9-201ENST00000303450 AKAP11Q9UKA4 1901 aa29.87■■■□□ 2.37
HOXC9-201ENST00000303450 KIAA0825Q8IV33 1275 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 ZGPATQ8N5A5 531 aaKnown RBP29.86■■■□□ 2.37
HOXC9-201ENST00000303450 GPRC5DQ9NZD1 345 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 CNOT7Q9UIV1 285 aaKnown RBP29.86■■■□□ 2.37
HOXC9-201ENST00000303450 TTC41PQ6P2S7 1318 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 WDR90Q96KV7 1748 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 TSHZ3Q63HK5 1081 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 BOLA2Q9H3K6 86 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 ABCF2Q9UG63 623 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 SALL1Q9NSC2 1324 aa29.86■■■□□ 2.37
HOXC9-201ENST00000303450 IQCA1LA6NCM1 817 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 F8W031 263 aaPredicted RBP29.85■■■□□ 2.37
HOXC9-201ENST00000303450 USP17L8P0C7I0 530 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 ZAP70P43403 619 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 MICALL2Q8IY33 904 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 OGFOD1Q8N543 542 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 RRAGCQ9HB90 399 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 GPBP1L1Q9HC44 474 aaPredicted RBP29.85■■■□□ 2.37
HOXC9-201ENST00000303450 HACL1Q9UJ83 578 aa29.85■■■□□ 2.37
HOXC9-201ENST00000303450 SALL3Q9BXA9 1300 aa29.84■■■□□ 2.37
HOXC9-201ENST00000303450 ERC2O15083 957 aa29.84■■■□□ 2.37
HOXC9-201ENST00000303450 H7C1D1 291 aa29.83■■■□□ 2.37
HOXC9-201ENST00000303450 EPS15P42566 896 aa29.83■■■□□ 2.37
HOXC9-201ENST00000303450 DNAJC2Q99543 621 aaKnown RBP29.83■■■□□ 2.37
HOXC9-201ENST00000303450 SUGT1Q9Y2Z0 365 aa29.83■■■□□ 2.37
HOXC9-201ENST00000303450 NDUFB9Q9Y6M9 179 aa29.83■■■□□ 2.37
HOXC9-201ENST00000303450 SCN4AP35499 1836 aa29.82■■■□□ 2.36
HOXC9-201ENST00000303450 VEGFAP15692 232 aaPredicted RBP29.82■■■□□ 2.36
HOXC9-201ENST00000303450 SPTY2D1Q68D10 685 aaPredicted RBP29.82■■■□□ 2.36
HOXC9-201ENST00000303450 TBC1D9Q6ZT07 1266 aa29.82■■■□□ 2.36
HOXC9-201ENST00000303450 NMRK2Q9NPI5 230 aa29.82■■■□□ 2.36
HOXC9-201ENST00000303450 HDAC9Q9UKV0 1011 aa29.82■■■□□ 2.36
HOXC9-201ENST00000303450 TTF2Q9UNY4 1162 aaKnown RBP29.82■■■□□ 2.36
HOXC9-201ENST00000303450 POTECB2RU33 542 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 CYP2E1P05181 493 aaPredicted RBP29.81■■■□□ 2.36
HOXC9-201ENST00000303450 LDHBP07195 334 aaKnown RBP29.81■■■□□ 2.36
HOXC9-201ENST00000303450 PDE1AP54750 535 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 GRIK5Q16478 980 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 STAP2Q9UGK3 403 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 SHTN1A0MZ66 631 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 GLRX3O76003 335 aaKnown RBP29.81■■■□□ 2.36
HOXC9-201ENST00000303450 PRDX5P30044 214 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 HAUS7Q99871 368 aa29.81■■■□□ 2.36
HOXC9-201ENST00000303450 MMP14P50281 582 aa29.8■■■□□ 2.36
HOXC9-201ENST00000303450 ERICH6Q7L0X2 663 aa29.8■■■□□ 2.36
HOXC9-201ENST00000303450 ZNF784Q8NCA9 323 aaPredicted RBP29.8■■■□□ 2.36
HOXC9-201ENST00000303450 LRP2BPQ9P2M1 347 aa29.8■■■□□ 2.36
HOXC9-201ENST00000303450 EPHX2P34913 555 aa29.79■■■□□ 2.36
HOXC9-201ENST00000303450 ZNF280AP59817 542 aaPredicted RBP29.79■■■□□ 2.36
HOXC9-201ENST00000303450 PLEKHM2Q8IWE5 1019 aa29.79■■■□□ 2.36
HOXC9-201ENST00000303450 PI4K2BQ8TCG2 481 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms