RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 LRRFIP2Q9Y608 721 aaKnown RBP18.77■□□□□ 0.6
UBXN1-202ENST00000301935 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
UBXN1-202ENST00000301935 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
UBXN1-202ENST00000301935 ATP8B2P98198 1209 aa18.76■□□□□ 0.59
UBXN1-202ENST00000301935 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-202ENST00000301935 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
UBXN1-202ENST00000301935 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
UBXN1-202ENST00000301935 RNF186Q9NXI6 227 aa18.76■□□□□ 0.59
UBXN1-202ENST00000301935 USP17L3A6NCW0 530 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 USP17L4A6NCW7 530 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 TRPA1O75762 1119 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 SLC34A2O95436 690 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 FKBP1BP68106 108 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 MTX1Q13505 466 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 USP17L1Q7RTZ2 530 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 PCDHB15Q9Y5E8 787 aa18.75■□□□□ 0.59
UBXN1-202ENST00000301935 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
UBXN1-202ENST00000301935 TTLL11Q8NHH1 800 aa18.74■□□□□ 0.59
UBXN1-202ENST00000301935 SUCLG2Q96I99 432 aa18.74■□□□□ 0.59
UBXN1-202ENST00000301935 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
UBXN1-202ENST00000301935 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-202ENST00000301935 REM2Q8IYK8 340 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-202ENST00000301935 GREM2Q9H772 168 aa18.73■□□□□ 0.59
UBXN1-202ENST00000301935 BSDC1Q9NW68 430 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-202ENST00000301935 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-202ENST00000301935 TNRC18O15417 2968 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-202ENST00000301935 BICC1Q9H694 974 aaKnown RBP18.72■□□□□ 0.59
UBXN1-202ENST00000301935 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
UBXN1-202ENST00000301935 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
UBXN1-202ENST00000301935 FOXO4P98177 505 aa18.71■□□□□ 0.59
UBXN1-202ENST00000301935 DACT2Q5SW24 774 aa18.71■□□□□ 0.59
UBXN1-202ENST00000301935 KAZALD1Q96I82 304 aa18.71■□□□□ 0.59
UBXN1-202ENST00000301935 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
UBXN1-202ENST00000301935 CSF1RP07333 972 aa18.7■□□□□ 0.58
UBXN1-202ENST00000301935 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
UBXN1-202ENST00000301935 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-202ENST00000301935 SSH3Q8TE77 659 aa18.7■□□□□ 0.58
UBXN1-202ENST00000301935 SCAF8Q9UPN6 1271 aaKnown RBP18.7■□□□□ 0.58
UBXN1-202ENST00000301935 A0A1B0GUL6 1792 aa18.7■□□□□ 0.58
UBXN1-202ENST00000301935 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 POLA2Q14181 598 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 MOB2Q70IA6 237 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 MXD3Q9BW11 206 aa18.69■□□□□ 0.58
UBXN1-202ENST00000301935 WNT10BO00744 389 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 STRIP1Q5VSL9 837 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 CTU1Q7Z7A3 348 aaKnown RBP18.68■□□□□ 0.58
UBXN1-202ENST00000301935 SIRT2Q8IXJ6 389 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
UBXN1-202ENST00000301935 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
UBXN1-202ENST00000301935 EPHA10Q5JZY3 1008 aa18.67■□□□□ 0.58
UBXN1-202ENST00000301935 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
UBXN1-202ENST00000301935 TXNRD3Q86VQ6 643 aa18.67■□□□□ 0.58
UBXN1-202ENST00000301935 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
UBXN1-202ENST00000301935 LEMD3Q9Y2U8 911 aa18.67■□□□□ 0.58
UBXN1-202ENST00000301935 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 UBE2Q2LH0YL09 131 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 SOX10P56693 466 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 DCTPP1Q9H773 170 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
UBXN1-202ENST00000301935 PNMA6EA0A0J9YXQ4 647 aa18.65■□□□□ 0.58
UBXN1-202ENST00000301935 SASH1O94885 1247 aa18.65■□□□□ 0.58
UBXN1-202ENST00000301935 IGHDP01880 384 aa18.65■□□□□ 0.58
UBXN1-202ENST00000301935 MMP14P50281 582 aa18.65■□□□□ 0.58
UBXN1-202ENST00000301935 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
UBXN1-202ENST00000301935 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
UBXN1-202ENST00000301935 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
UBXN1-202ENST00000301935 RAB11FIP3O75154 756 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 ITGA6P23229 1130 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 KLRK1P26718 216 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 NF2P35240 595 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 COPRSQ9NQ92 184 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
UBXN1-202ENST00000301935 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
UBXN1-202ENST00000301935 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.57
UBXN1-202ENST00000301935 LAMB1P07942 1786 aa18.63■□□□□ 0.57
UBXN1-202ENST00000301935 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
UBXN1-202ENST00000301935 TTLL5Q6EMB2 1281 aa18.63■□□□□ 0.57
UBXN1-202ENST00000301935 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
UBXN1-202ENST00000301935 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
UBXN1-202ENST00000301935 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
UBXN1-202ENST00000301935 KIAA0825Q8IV33 1275 aa18.62■□□□□ 0.57
UBXN1-202ENST00000301935 ZNF296Q8WUU4 475 aaPredicted RBP18.62■□□□□ 0.57
UBXN1-202ENST00000301935 MPHOSPH8Q99549 860 aa18.62■□□□□ 0.57
UBXN1-202ENST00000301935 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
UBXN1-202ENST00000301935 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
UBXN1-202ENST00000301935 SURF6O75683 361 aaKnown RBP18.61■□□□□ 0.57
UBXN1-202ENST00000301935 TM4SF4P48230 202 aa18.61■□□□□ 0.57
UBXN1-202ENST00000301935 RFX5P48382 616 aaPredicted RBP18.61■□□□□ 0.57
UBXN1-202ENST00000301935 GTF2IP78347 998 aa18.61■□□□□ 0.57
UBXN1-202ENST00000301935 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
UBXN1-202ENST00000301935 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
UBXN1-202ENST00000301935 ZBED3Q96IU2 234 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms