RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 PPFIA3O75145 1194 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
PGAP3-201ENST00000300658 ABCC12Q96J65 1359 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 COL4A1P02462 1669 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 PUM3Q15397 648 aaKnown RBP19.55■□□□□ 0.72
PGAP3-201ENST00000300658 LPIN2Q92539 896 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 AK7Q96M32 723 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 WWC3Q9ULE0 1092 aa19.55■□□□□ 0.72
PGAP3-201ENST00000300658 PFKFB2O60825 505 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 ARID4AP29374 1257 aaPredicted RBP19.54■□□□□ 0.72
PGAP3-201ENST00000300658 CCT2P78371 535 aaKnown RBP19.54■□□□□ 0.72
PGAP3-201ENST00000300658 MAP7D2Q96T17 732 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 NCOA5Q9HCD5 579 aaKnown RBP19.54■□□□□ 0.72
PGAP3-201ENST00000300658 DENND2AQ9ULE3 1009 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 IDH1O75874 414 aaKnown RBP19.54■□□□□ 0.72
PGAP3-201ENST00000300658 UBE2HP62256 183 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 RREB1Q92766 1687 aa19.54■□□□□ 0.72
PGAP3-201ENST00000300658 WTIPA6NIX2 430 aaPredicted RBP19.53■□□□□ 0.72
PGAP3-201ENST00000300658 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
PGAP3-201ENST00000300658 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 FAM182BQ5T319 152 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 LRP5O75197 1615 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 UBAP1LF5GYI3 381 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 PDCP20941 246 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 TTC6Q86TZ1 520 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 ZSCAN30Q86W11 494 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
PGAP3-201ENST00000300658 MPHOSPH8Q99549 860 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 NSUN7Q8NE18 718 aaKnown RBP19.53■□□□□ 0.72
PGAP3-201ENST00000300658 SMARCC2Q8TAQ2 1214 aa19.53■□□□□ 0.72
PGAP3-201ENST00000300658 VPS72Q15906 364 aa19.52■□□□□ 0.72
PGAP3-201ENST00000300658 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.52■□□□□ 0.72
PGAP3-201ENST00000300658 RNF214Q8ND24 703 aa19.52■□□□□ 0.72
PGAP3-201ENST00000300658 NBPF3Q9H094 633 aa19.52■□□□□ 0.72
PGAP3-201ENST00000300658 TFIP11Q9UBB9 837 aaKnown RBP19.52■□□□□ 0.72
PGAP3-201ENST00000300658 ZNF532Q9HCE3 1301 aa19.52■□□□□ 0.71
PGAP3-201ENST00000300658 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.71
PGAP3-201ENST00000300658 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.71
PGAP3-201ENST00000300658 RASGRF1Q13972 1273 aa19.52■□□□□ 0.71
PGAP3-201ENST00000300658 DDX60Q8IY21 1712 aaKnown RBP19.52■□□□□ 0.71
PGAP3-201ENST00000300658 UQCRHLA0A096LP55 91 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 UQCRHP07919 91 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 PDE6AP16499 860 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 MYH7P12883 1935 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 BCAMP50895 628 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 IMMTQ16891 758 aaKnown RBP19.51■□□□□ 0.71
PGAP3-201ENST00000300658 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 PPP1R9BQ96SB3 815 aa19.51■□□□□ 0.71
PGAP3-201ENST00000300658 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.51■□□□□ 0.71
PGAP3-201ENST00000300658 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
PGAP3-201ENST00000300658 CTNNA3Q9UI47 895 aa19.5■□□□□ 0.71
PGAP3-201ENST00000300658 MSNP26038 577 aaKnown RBP19.5■□□□□ 0.71
PGAP3-201ENST00000300658 FOSBP53539 338 aa19.5■□□□□ 0.71
PGAP3-201ENST00000300658 ANTXR2P58335 489 aa19.5■□□□□ 0.71
PGAP3-201ENST00000300658 SPATA5Q8NB90 893 aa19.5■□□□□ 0.71
PGAP3-201ENST00000300658 UQCRFS1P1P0C7P4 283 aa19.49■□□□□ 0.71
PGAP3-201ENST00000300658 SLC5A1P13866 664 aa19.49■□□□□ 0.71
PGAP3-201ENST00000300658 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
PGAP3-201ENST00000300658 UBE3CQ15386 1083 aa19.49■□□□□ 0.71
PGAP3-201ENST00000300658 MB21D2Q8IYB1 491 aaPredicted RBP19.49■□□□□ 0.71
PGAP3-201ENST00000300658 BICDL1Q6ZP65 573 aa19.49■□□□□ 0.71
PGAP3-201ENST00000300658 BCL2L12Q9HB09 334 aa19.49■□□□□ 0.71
PGAP3-201ENST00000300658 PTPDC1A2A3K4 754 aa19.48■□□□□ 0.71
PGAP3-201ENST00000300658 CHRNDQ07001 517 aa19.48■□□□□ 0.71
PGAP3-201ENST00000300658 RESTQ13127 1097 aa19.48■□□□□ 0.71
PGAP3-201ENST00000300658 SYAP1Q96A49 352 aaPredicted RBP19.48■□□□□ 0.71
PGAP3-201ENST00000300658 KRT85P78386 507 aa19.48■□□□□ 0.71
PGAP3-201ENST00000300658 AMIGO3Q86WK7 504 aa19.48■□□□□ 0.71
PGAP3-201ENST00000300658 COL5A3P25940 1745 aaPredicted RBP19.48■□□□□ 0.71
PGAP3-201ENST00000300658 ZNF213O14771 459 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 DMTNQ08495 405 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 CCDC183Q5T5S1 534 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 RAB11FIP4Q86YS3 637 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 ZNF274Q96GC6 653 aaPredicted RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 INCENPQ9NQS7 918 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 PRC1O43663 620 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 CCDC173Q0VFZ6 552 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 ZSCAN25Q6NSZ9 544 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 CLEC4GQ6UXB4 293 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 TBC1D10CQ8IV04 446 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 STRBPQ96SI9 672 aaKnown RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 LLPHQ9BRT6 129 aaKnown RBP19.47■□□□□ 0.71
PGAP3-201ENST00000300658 TSPY26PQ9H489 355 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 TAF1P21675 1872 aa19.47■□□□□ 0.71
PGAP3-201ENST00000300658 EVCP57679 992 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 FBXL16Q8N461 479 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
PGAP3-201ENST00000300658 SALL1Q9NSC2 1324 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 RTL9Q8NET4 1388 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 MAGEB6Q8N7X4 407 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
PGAP3-201ENST00000300658 ZNF652Q9Y2D9 606 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 EP400Q96L91 3159 aa19.46■□□□□ 0.71
PGAP3-201ENST00000300658 APPP05067 770 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms