RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 COL5A2P05997 1499 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 PPEF1O14829 653 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 DSCC1Q9BVC3 393 aa9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 COL3A1P02461 1466 aaPredicted RBP9.67□□□□□ -0.86
SNRPD1-201ENST00000300413 ZNF76P36508 570 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 GRAPQ13588 217 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 TNFAIP1Q13829 316 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 GRAPLQ8TC17 118 aaPredicted RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 HAUS7Q99871 368 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 MBD4O95243 580 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 CHRNDQ07001 517 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 STIM1Q13586 685 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 DHX32Q7L7V1 743 aaKnown RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 ZSCAN16Q9H4T2 348 aaPredicted RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 RBM28Q9NW13 759 aaKnown RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 TNS2Q63HR2 1409 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 ZNF804BA4D1E1 1349 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 POLA2Q14181 598 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 MARCH10Q8NA82 808 aaPredicted RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 SPATA32Q96LK8 384 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 XRN1Q8IZH2 1706 aaKnown RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 B4DLN1 442 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 SGSM2O43147 1006 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 PPIP5K2O43314 1243 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 ME1P48163 572 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 MRPL12P52815 198 aaKnown RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 MASTLQ96GX5 879 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 GREM2Q9H772 168 aa9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
SNRPD1-201ENST00000300413 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 ABCC6O95255 1503 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC194A0A1B0GVG4 234 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 RTN1Q16799 776 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 UBE3CQ15386 1083 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 CCDC93Q567U6 631 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 PLA2G12BQ9BX93 195 aa9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 ARPP21Q9UBL0 812 aaPredicted RBP9.65□□□□□ -0.86
SNRPD1-201ENST00000300413 FIBPO43427 364 aa9.65□□□□□ -0.87
SNRPD1-201ENST00000300413 ATP2B1P20020 1258 aa9.65□□□□□ -0.87
SNRPD1-201ENST00000300413 HAND2P61296 217 aa9.65□□□□□ -0.87
SNRPD1-201ENST00000300413 SLC16A10Q8TF71 515 aa9.65□□□□□ -0.87
SNRPD1-201ENST00000300413 TEKT1Q969V4 418 aa9.65□□□□□ -0.87
SNRPD1-201ENST00000300413 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 PRC1O43663 620 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 CALML3P27482 149 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 NLRP5P59047 1200 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 KLHDC4Q8TBB5 520 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 ORC3Q9UBD5 711 aaPredicted RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 F8W031 263 aaPredicted RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 CCDC102BQ68D86 513 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 INTS4Q96HW7 963 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 GLT8D2Q9H1C3 349 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 STX8Q9UNK0 236 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 BAG4O95429 457 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 KRT18P05783 430 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 ABCC12Q96J65 1359 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 GPAA1O43292 621 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 TAF5LO75529 589 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 IPO7O95373 1038 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 FBXO41Q8TF61 875 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 BRF1Q92994 677 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 TM6SF1Q9BZW5 370 aa9.64□□□□□ -0.87
SNRPD1-201ENST00000300413 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 H7C1D1 291 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 C8orf34Q49A92 452 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 TTLL11Q8NHH1 800 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 PES1O00541 588 aaKnown RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 SUSD4Q5VX71 490 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 EAF2Q96CJ1 260 aaPredicted RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 VEZTQ9HBM0 779 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 CCDC39Q9UFE4 941 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 ZAP70P43403 619 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 PICALMQ13492 652 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 GSE1Q14687 1217 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 R3HCC1Q9Y3T6 440 aaKnown RBP9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 RUFY3Q7L099 469 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
SNRPD1-201ENST00000300413 MAP2P11137 1827 aaKnown RBP9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 TRAK2O60296 914 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 SMC2O95347 1197 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 MMP10P09238 476 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 WWC2Q6AWC2 1192 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
SNRPD1-201ENST00000300413 CREBRFQ8IUR6 639 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms