RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 C6orf163Q5TEZ5 329 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 CCDC160A6NGH7 325 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 CHMP2AO43633 222 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 CCDC172P0C7W6 258 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ERCC3P19447 782 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 FAM200AQ8TCP9 573 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 SPDYE3A6NKU9 549 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ZEB2O60315 1214 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 TACC1O75410 805 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 PSMC4P43686 418 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KSR2Q6VAB6 950 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 DYNC1I1O14576 645 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 C6orf50Q9HD87 102 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 HDAC9Q9UKV0 1011 aa15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 TLDC2A0PJX2 215 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 TRIM75PA6NK02 468 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 RLBP1P12271 317 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 IRS4O14654 1257 aaPredicted RBP15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KRT222Q8N1A0 295 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 DDX23Q9BUQ8 820 aaKnown RBP15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KCNK9Q9NPC2 374 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 VWA3AA6NCI4 1184 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 SEC24BO95487 1268 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
CHRFAM7A-201ENST00000299847 HSPA4P34932 840 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KRT5P13647 590 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 FAM160A1Q05DH4 1040 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 IL15P40933 162 aaPredicted RBP15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 NCKAP5LQ9HCH0 1330 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MAEAQ7L5Y9 396 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MICALL1Q8N3F8 863 aa15.35■□□□□ 0.05
CHRFAM7A-201ENST00000299847 MSH6P52701 1360 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 UAP1Q16222 522 aaPredicted RBP15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 RUFY3Q7L099 469 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 GOLGA1Q92805 767 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 LONRF3Q496Y0 759 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KRT79Q5XKE5 535 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 PRIMPOLQ96LW4 560 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 CCDC42Q96M95 316 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 NSD2O96028 1365 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KRT9P35527 623 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 TMTC2Q8N394 836 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KIF5AQ12840 1032 aa15.34■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ZYXQ15942 572 aaKnown RBP15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 LETM2Q2VYF4 491 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 ZBTB16Q05516 673 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 PPP1R7Q15435 360 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 UBLCP1Q8WVY7 318 aaPredicted RBP15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 IMPG2Q9BZV3 1241 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 NDUFB9Q9Y6M9 179 aa15.33■□□□□ 0.05
CHRFAM7A-201ENST00000299847 IL16Q14005 1332 aa15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 CCDC24Q8N4L8 307 aa15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 SF3A3Q12874 501 aaKnown RBP eCLIP15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 RABEP2Q9H5N1 569 aa15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
CHRFAM7A-201ENST00000299847 NDC80O14777 642 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 MBD4O95243 580 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 NSRP1Q9H0G5 558 aaKnown RBP15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 TFCP2L1Q9NZI6 479 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 B4E1Z4 1266 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 CAPN2P17655 700 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 RAB3IL1Q8TBN0 382 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 DDX39AO00148 427 aaKnown RBP15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 BACH1O14867 736 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 DTHD1Q6ZMT9 781 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 ARMT1Q9H993 441 aa15.32■□□□□ 0.04
CHRFAM7A-201ENST00000299847 DDB1Q16531 1140 aa15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 MAP3K1Q13233 1512 aa15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 SREK1Q8WXA9 508 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 HGSO14964 777 aaPredicted RBP15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 RASA3Q14644 834 aa15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
CHRFAM7A-201ENST00000299847 ZNF594Q96JF6 807 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms