RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
PTCD1-201ENST00000292478 PPP1R2P41236 205 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 GOPCQ9HD26 462 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 PRIM1P49642 420 aaKnown RBP14.55□□□□□ -0.08
PTCD1-201ENST00000292478 HLTFQ14527 1009 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTCD1-201ENST00000292478 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 FERMT2Q96AC1 680 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 SPAG5Q96R06 1193 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 CEP112Q8N8E3 955 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 SAMM50Q9Y512 469 aa14.55□□□□□ -0.08
PTCD1-201ENST00000292478 CTAGE15A4D2H0 777 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 PPFIA3O75145 1194 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CCDC175P0C221 793 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CTAGE8P0CG41 777 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CTAGE6Q86UF2 777 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CTAGE4Q8IX94 777 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CTNNBL1Q8WYA6 563 aaPredicted RBP14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CCDC113Q9H0I3 377 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 GOLGA6L10A0A0M3HER8 536 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 KRT13P13646 458 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 SYT1P21579 422 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 ASIC1P78348 528 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 TNNI3KQ59H18 835 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 KRT79Q5XKE5 535 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 FPGT-TNNI3KV9GXZ4 949 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 RTCBQ9Y3I0 505 aaKnown RBP14.54□□□□□ -0.08
PTCD1-201ENST00000292478 CTNNA2P26232 953 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 SPECC1Q5M775 1068 aa14.54□□□□□ -0.08
PTCD1-201ENST00000292478 G2E3Q7L622 706 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 ACSBG1Q96GR2 724 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 TACC1O75410 805 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 BBXQ8WY36 941 aaPredicted RBP14.53□□□□□ -0.08
PTCD1-201ENST00000292478 DHX58Q96C10 678 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 SELENOOQ9BVL4 669 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 ELP1O95163 1332 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 CERS3Q8IU89 383 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 LMBR1Q8WVP7 490 aa14.53□□□□□ -0.08
PTCD1-201ENST00000292478 TTC12Q9H892 705 aaPredicted RBP14.53□□□□□ -0.08
PTCD1-201ENST00000292478 DNA2P51530 1060 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 IQUBQ8NA54 791 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.08
PTCD1-201ENST00000292478 KDM5AP29375 1690 aaKnown RBP14.52□□□□□ -0.08
PTCD1-201ENST00000292478 SMARCC2Q8TAQ2 1214 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 EYA3Q99504 573 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 IQSEC3Q9UPP2 1182 aaPredicted RBP14.52□□□□□ -0.08
PTCD1-201ENST00000292478 SBNO2Q9Y2G9 1366 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 NEO1Q92859 1461 aa14.52□□□□□ -0.08
PTCD1-201ENST00000292478 PLEKHG3A1L390 1219 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 LDHBP07195 334 aaKnown RBP14.52□□□□□ -0.09
PTCD1-201ENST00000292478 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.52□□□□□ -0.09
PTCD1-201ENST00000292478 TMX1Q9H3N1 280 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 MCM9Q9NXL9 1143 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 RILPL1Q5EBL4 403 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 FERMT1Q9BQL6 677 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 SLC27A2O14975 620 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 TTLL12Q14166 644 aaPredicted RBP14.52□□□□□ -0.09
PTCD1-201ENST00000292478 OGFOD1Q8N543 542 aa14.52□□□□□ -0.09
PTCD1-201ENST00000292478 HSF2BPO75031 334 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 TUBBP07437 444 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 PUM3Q15397 648 aaKnown RBP14.51□□□□□ -0.09
PTCD1-201ENST00000292478 SGSM2O43147 1006 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 KRT86O43790 486 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 SEC24BO95487 1268 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 KIAA0753Q2KHM9 967 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 DNAI1Q9UI46 699 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 POLR3GO15318 223 aaPredicted RBP14.51□□□□□ -0.09
PTCD1-201ENST00000292478 SLU7O95391 586 aaKnown RBP14.51□□□□□ -0.09
PTCD1-201ENST00000292478 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 GIGYF2Q6Y7W6 1299 aaKnown RBP14.51□□□□□ -0.09
PTCD1-201ENST00000292478 DTHD1Q6ZMT9 781 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 ZC3H12CQ9C0D7 883 aaKnown RBP14.51□□□□□ -0.09
PTCD1-201ENST00000292478 SLC52A2Q9HAB3 445 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 APPBP2Q92624 585 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 ARFGAP3Q9NP61 516 aa14.51□□□□□ -0.09
PTCD1-201ENST00000292478 CTAGE9A4FU28 777 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 PRPF4BQ13523 1007 aaKnown RBP14.5□□□□□ -0.09
PTCD1-201ENST00000292478 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 PDE8AO60658 829 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 SLC4A8Q2Y0W8 1093 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 TTC6Q86TZ1 520 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 KRT222Q8N1A0 295 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 CFAP74Q9C0B2 1584 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 SPDYE3A6NKU9 549 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 DEXIO95424 95 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 WDR78Q5VTH9 848 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 BCCIPQ9P287 314 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCD1-201ENST00000292478 B4DLN1 442 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 MRPL12P52815 198 aaKnown RBP14.5□□□□□ -0.09
PTCD1-201ENST00000292478 BICD1Q96G01 975 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 SNX14Q9Y5W7 946 aa14.5□□□□□ -0.09
PTCD1-201ENST00000292478 RASAL2Q9UJF2 1139 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 USP19O94966 1318 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 KIF5AQ12840 1032 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 MACROD2A1Z1Q3 448 aa14.49□□□□□ -0.09
PTCD1-201ENST00000292478 MBD4O95243 580 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms