RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 CCDC158Q5M9N0 1113 aa18.82■□□□□ 0.6
NCK1-201ENST00000288986 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
NCK1-201ENST00000288986 STRIP1Q5VSL9 837 aa18.82■□□□□ 0.6
NCK1-201ENST00000288986 DBNLQ9UJU6 430 aaKnown RBP18.82■□□□□ 0.6
NCK1-201ENST00000288986 ZBTB12Q9Y330 459 aaPredicted RBP18.82■□□□□ 0.6
NCK1-201ENST00000288986 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
NCK1-201ENST00000288986 LNPKQ9C0E8 428 aa18.82■□□□□ 0.6
NCK1-201ENST00000288986 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
NCK1-201ENST00000288986 CHAF1AQ13111 956 aaPredicted RBP18.81■□□□□ 0.6
NCK1-201ENST00000288986 C8orf34Q49A92 452 aa18.8■□□□□ 0.6
NCK1-201ENST00000288986 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
NCK1-201ENST00000288986 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
NCK1-201ENST00000288986 DACT2Q5SW24 774 aa18.8■□□□□ 0.6
NCK1-201ENST00000288986 RSBN1LQ6PCB5 846 aaPredicted RBP18.8■□□□□ 0.6
NCK1-201ENST00000288986 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
NCK1-201ENST00000288986 SCN9AQ15858 1988 aa18.79■□□□□ 0.6
NCK1-201ENST00000288986 GMPSP49915 693 aaPredicted RBP18.79■□□□□ 0.6
NCK1-201ENST00000288986 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 DENND2AQ9ULE3 1009 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 SEMA3EO15041 775 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 UQCRFS1P1P0C7P4 283 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 RASGRF1Q13972 1273 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 MFSD14BQ5SR56 506 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 FAM205AQ6ZU69 1335 aa18.78■□□□□ 0.6
NCK1-201ENST00000288986 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
NCK1-201ENST00000288986 LMOD1P29536 600 aaPredicted RBP18.77■□□□□ 0.6
NCK1-201ENST00000288986 SCNN1DP51172 638 aa18.77■□□□□ 0.6
NCK1-201ENST00000288986 ZNF784Q8NCA9 323 aaPredicted RBP18.77■□□□□ 0.6
NCK1-201ENST00000288986 AGBL3Q8NEM8 1001 aa18.77■□□□□ 0.6
NCK1-201ENST00000288986 L3MBTL3Q96JM7 780 aaPredicted RBP18.77■□□□□ 0.6
NCK1-201ENST00000288986 ARID4AP29374 1257 aaPredicted RBP18.76■□□□□ 0.59
NCK1-201ENST00000288986 C16orf71Q8IYS4 520 aaPredicted RBP18.76■□□□□ 0.59
NCK1-201ENST00000288986 DPF2Q92785 391 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 NMRK2Q9NPI5 230 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 MYO3BQ8WXR4 1341 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 SPATA5Q8NB90 893 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 WDR66Q8TBY9 1149 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 TBC1D22AQ8WUA7 517 aa18.76■□□□□ 0.59
NCK1-201ENST00000288986 CNOT7Q9UIV1 285 aaKnown RBP18.76■□□□□ 0.59
NCK1-201ENST00000288986 IQCA1LA6NCM1 817 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 VEGFAP15692 232 aaPredicted RBP18.75■□□□□ 0.59
NCK1-201ENST00000288986 EPS15P42566 896 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 MCAMP43121 646 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 SCARF1Q14162 830 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 PI16Q6UXB8 463 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 GPRC5DQ9NZD1 345 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 HMG20BQ9P0W2 317 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 HACL1Q9UJ83 578 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
NCK1-201ENST00000288986 F8W031 263 aaPredicted RBP18.74■□□□□ 0.59
NCK1-201ENST00000288986 MICALL2Q8IY33 904 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 OGFOD1Q8N543 542 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
NCK1-201ENST00000288986 SNRKQ9NRH2 765 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 POTECB2RU33 542 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 H7C1D1 291 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 USP17L8P0C7I0 530 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
NCK1-201ENST00000288986 PLEKHM2Q8IWE5 1019 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 GMLQ99445 158 aa18.74■□□□□ 0.59
NCK1-201ENST00000288986 SHTN1A0MZ66 631 aa18.73■□□□□ 0.59
NCK1-201ENST00000288986 GPATCH3Q96I76 525 aa18.73■□□□□ 0.59
NCK1-201ENST00000288986 ABCF2Q9UG63 623 aa18.73■□□□□ 0.59
NCK1-201ENST00000288986 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
NCK1-201ENST00000288986 ZBTB22O15209 634 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 EPHX2P34913 555 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
NCK1-201ENST00000288986 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
NCK1-201ENST00000288986 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 HDAC9Q9UKV0 1011 aa18.72■□□□□ 0.59
NCK1-201ENST00000288986 PDS5AQ29RF7 1337 aaKnown RBP18.71■□□□□ 0.59
NCK1-201ENST00000288986 ZAP70P43403 619 aa18.71■□□□□ 0.59
NCK1-201ENST00000288986 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.59
NCK1-201ENST00000288986 ZGPATQ8N5A5 531 aaKnown RBP18.71■□□□□ 0.59
NCK1-201ENST00000288986 BOLA2Q9H3K6 86 aa18.71■□□□□ 0.59
NCK1-201ENST00000288986 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
NCK1-201ENST00000288986 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
NCK1-201ENST00000288986 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
NCK1-201ENST00000288986 ATP5JP18859 108 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 GRIK5Q16478 980 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 SAMD7Q7Z3H4 446 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 WDR90Q96KV7 1748 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 SALL1Q9NSC2 1324 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 PSME4Q14997 1843 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 MX1P20591 662 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 PRDX5P30044 214 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
NCK1-201ENST00000288986 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
NCK1-201ENST00000288986 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
NCK1-201ENST00000288986 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
NCK1-201ENST00000288986 CYP2E1P05181 493 aaPredicted RBP18.69■□□□□ 0.58
NCK1-201ENST00000288986 LDHBP07195 334 aaKnown RBP18.69■□□□□ 0.58
NCK1-201ENST00000288986 TBC1D10BQ4KMP7 808 aaPredicted RBP18.69■□□□□ 0.58
NCK1-201ENST00000288986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
NCK1-201ENST00000288986 LRP2BPQ9P2M1 347 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms