RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 TMTC2Q8N394 836 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 ZNF219Q9P2Y4 722 aaPredicted RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 BRPF3Q9ULD4 1205 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 CAMTA1Q9Y6Y1 1673 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 PHLPP1O60346 1717 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 LOC102724428A0A0B4J2F2 783 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 A0A0D9SFI3 127 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 PABPN1LA6NDY0 278 aaKnown RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 CTAGE5O15320 804 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 CAVIN2O95810 425 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 SYT1P21579 422 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 KCNA4P22459 653 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 SIK1P57059 783 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 TPTE2Q6XPS3 522 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 CLEC17AQ6ZS10 378 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 NBPF5PQ86XG9 351 aaPredicted RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 ABCF2Q9UG63 623 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 MATR3P43243 847 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS8-201ENST00000287546 MAP3K11Q16584 847 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 ZSCAN23Q3MJ62 389 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 BICDL1Q6ZP65 573 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 NLRP10Q86W26 655 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 PLA2G12BQ9BX93 195 aa8.04□□□□□ -1.12
VPS8-201ENST00000287546 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
VPS8-201ENST00000287546 SYCE3A1L190 88 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 GOLGA8BA8MQT2 603 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 KRT18P05783 430 aaKnown RBP8.03□□□□□ -1.12
VPS8-201ENST00000287546 PTH1RQ03431 593 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 UVSSAQ2YD98 709 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 NBPF10Q6P3W6 841 aaKnown RBP8.03□□□□□ -1.12
VPS8-201ENST00000287546 NBPF15Q8N660 670 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 ZNF287Q9HBT7 754 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 TAF5LO75529 589 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 CD2BP2O95400 341 aaKnown RBP8.03□□□□□ -1.12
VPS8-201ENST00000287546 DDX11Q96FC9 970 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 SDF4Q9BRK5 362 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 EP400Q96L91 3159 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 RFC4P35249 363 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 DHX8Q14562 1220 aaKnown RBP8.03□□□□□ -1.12
VPS8-201ENST00000287546 TNIP1Q15025 636 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 EPHA10Q5JZY3 1008 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 PRKAG2Q9UGJ0 569 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 ZBTB1Q9Y2K1 713 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
VPS8-201ENST00000287546 NECAB1Q8N987 351 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
VPS8-201ENST00000287546 ME1P48163 572 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 ZNF445P59923 1031 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 NECTIN1Q15223 517 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 TAF12Q16514 161 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 FERMT3Q86UX7 667 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
VPS8-201ENST00000287546 LDHCP07864 332 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 IQCA1Q86XH1 822 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 JDP2Q8WYK2 163 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 FOSBP53539 338 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 KIF22Q14807 665 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 RNF214Q8ND24 703 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 CDK5RAP3Q96JB5 506 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 SLC12A7Q9Y666 1083 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.13
VPS8-201ENST00000287546 PDE8BO95263 885 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 LRRC24Q50LG9 513 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.02□□□□□ -1.13
VPS8-201ENST00000287546 USP48Q86UV5 1035 aa8.02□□□□□ -1.13
VPS8-201ENST00000287546 LARP6Q9BRS8 491 aaKnown RBP8.02□□□□□ -1.13
VPS8-201ENST00000287546 SRCAPQ6ZRS2 3230 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 KDM3BQ7LBC6 1761 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 PRC1O43663 620 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 CYP19A1P11511 503 aaPredicted RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 CRKLP46109 303 aaKnown RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 FOXO4P98177 505 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 CLEC4GQ6UXB4 293 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 CRACR2BQ8N4Y2 399 aaPredicted RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 TMEM87BQ96K49 555 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 LMBRD1Q9NUN5 540 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 DENND2AQ9ULE3 1009 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 KLF18A0A0U1RQI7 1052 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 IFIT3O14879 490 aaKnown RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 BAG6P46379 1132 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 BMS1Q14692 1282 aaKnown RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 UBE3CQ15386 1083 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 RASEFQ8IZ41 740 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 ORC3Q9UBD5 711 aaPredicted RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 METAP2P50579 478 aaKnown RBP eCLIP8.01□□□□□ -1.13
VPS8-201ENST00000287546 GSTO1P78417 241 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
VPS8-201ENST00000287546 DZIP1Q86YF9 867 aaKnown RBP8.01□□□□□ -1.13
VPS8-201ENST00000287546 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.134e-6■■■□□ 14.6
VPS8-201ENST00000287546 CEP131Q9UPN4 1083 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms