RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 C12orf49Q9H741 205 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 CYLDQ9NQC7 956 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 NASPP49321 788 aaPredicted RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 CDKN1CP49918 316 aaPredicted RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 TERF1P54274 439 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 DSC3Q14574 896 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 RBCK1Q9BYM8 510 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 ZNF408Q9H9D4 720 aa9.33□□□□□ -0.92
ZIM3-201ENST00000269834 FBXO9Q9UK97 447 aaPredicted RBP9.33□□□□□ -0.92
ZIM3-201ENST00000269834 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
ZIM3-201ENST00000269834 LRRC37A3O60309 1634 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 RNF135Q8IUD6 432 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 SLC39A13Q96H72 371 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 EYA1Q99502 592 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 ARPC5LQ9BPX5 153 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 USP26Q9BXU7 913 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 PTPRCP08575 1304 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 ZBBXA8MT70 800 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 IGHA2P01877 340 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 COMMD10Q9Y6G5 202 aa9.32□□□□□ -0.92
ZIM3-201ENST00000269834 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
ZIM3-201ENST00000269834 MZF1P28698 734 aaPredicted RBP9.31□□□□□ -0.92
ZIM3-201ENST00000269834 SH3TC2Q8TF17 1288 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 DDX49Q9Y6V7 483 aaKnown RBP9.31□□□□□ -0.92
ZIM3-201ENST00000269834 CACNA1FO60840 1977 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 ST18O60284 1047 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 HMOX1P09601 288 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 PLEKHG4Q58EX7 1191 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 C10orf62Q5T681 223 aaPredicted RBP9.31□□□□□ -0.92
ZIM3-201ENST00000269834 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 C8orf58Q8NAV2 365 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 RTL1A6NKG5 1358 aa9.31□□□□□ -0.92
ZIM3-201ENST00000269834 HMGB1P1B2RPK0 211 aaPredicted RBP9.3□□□□□ -0.92
ZIM3-201ENST00000269834 ZNF500O60304 480 aaPredicted RBP9.3□□□□□ -0.92
ZIM3-201ENST00000269834 REC8O95072 547 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
ZIM3-201ENST00000269834 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
ZIM3-201ENST00000269834 SNTG2Q9NY99 539 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 CEP126Q9P2H0 1117 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 KCNG1Q9UIX4 513 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 ARHGEF10O15013 1369 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 XRN1Q8IZH2 1706 aaKnown RBP9.3□□□□□ -0.92
ZIM3-201ENST00000269834 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 ESYT3A0FGR9 886 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 CHMP4BP1P59074 171 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 PAK2Q13177 524 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 TYW1BQ6NUM6 668 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 NRBP1Q9UHY1 535 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 MSH6P52701 1360 aa9.3□□□□□ -0.92
ZIM3-201ENST00000269834 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 HSP90AA2PQ14568 343 aaPredicted RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 CEP85Q6P2H3 762 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 C8orf48Q96LL4 319 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 OSBPL3Q9H4L5 887 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 LMBRD1Q9NUN5 540 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 KLF15Q9UIH9 416 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 OVOS2A0A0J9YW53 1432 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 OVOS2Q6IE36 1432 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 SSH2Q76I76 1423 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 RBM10P98175 930 aaKnown RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 TKFCQ3LXA3 575 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
ZIM3-201ENST00000269834 PDLIM2Q96JY6 352 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 BOLA1Q9Y3E2 137 aa9.29□□□□□ -0.92
ZIM3-201ENST00000269834 OFD1O75665 1012 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 ZSCAN23Q3MJ62 389 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 ZNF654Q8IZM8 581 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 COG3Q96JB2 828 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 FER1L4A9Z1Z3 1794 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 MCM2P49736 904 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 PRSS12P56730 875 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 PRKD2Q9BZL6 878 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
ZIM3-201ENST00000269834 CHL1O00533 1208 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 SDSP20132 328 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 MCCP23508 829 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 MCM5P33992 734 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 ETFBP38117 255 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 SEC13P55735 322 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 HAX1O00165 279 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 SMAPO00193 183 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 PPP1R12AO14974 1030 aaPredicted RBP9.27□□□□□ -0.93
ZIM3-201ENST00000269834 ERC2O15083 957 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 HMMRO75330 724 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 MSNP26038 577 aaKnown RBP9.27□□□□□ -0.93
ZIM3-201ENST00000269834 CCDC102BQ68D86 513 aa9.27□□□□□ -0.93
ZIM3-201ENST00000269834 MCTP1Q6DN14 999 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms