RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TTLL5Q6EMB2 1281 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 PLA2G12BQ9BX93 195 aa15.23■□□□□ 0.03
CPSF6-201ENST00000266679 NAP1L2Q9ULW6 460 aaPredicted RBP15.23■□□□□ 0.03
CPSF6-201ENST00000266679 NUP98P52948 1817 aa15.22■□□□□ 0.03
CPSF6-201ENST00000266679 WASHC4Q2M389 1173 aa15.22■□□□□ 0.03
CPSF6-201ENST00000266679 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
CPSF6-201ENST00000266679 CSF1RP07333 972 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 LEO1Q8WVC0 666 aaPredicted RBP15.21■□□□□ 0.03
CPSF6-201ENST00000266679 FBXO3Q9UK99 471 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 ZAP70P43403 619 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
CPSF6-201ENST00000266679 METTL24Q5JXM2 366 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 NLRP10Q86W26 655 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 TICAM2Q86XR7 235 aa15.21■□□□□ 0.03
CPSF6-201ENST00000266679 NSUN7Q8NE18 718 aaKnown RBP15.21■□□□□ 0.03
CPSF6-201ENST00000266679 SCAND2PQ9GZW5 306 aaPredicted RBP15.21■□□□□ 0.03
CPSF6-201ENST00000266679 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 EXOSC10Q01780 885 aaKnown RBP15.2■□□□□ 0.02
CPSF6-201ENST00000266679 PI16Q6UXB8 463 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 SMARCC2Q8TAQ2 1214 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 SLC4A9Q96Q91 983 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 GREM2Q9H772 168 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 CDHR2Q9BYE9 1310 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 PTPDC1A2A3K4 754 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 ITGA6P23229 1130 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 CAMK4Q16566 473 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 ATP2B3Q16720 1220 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 MPNDQ8N594 471 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 LLPHQ9BRT6 129 aaKnown RBP15.2■□□□□ 0.02
CPSF6-201ENST00000266679 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
CPSF6-201ENST00000266679 ZBTB1Q9Y2K1 713 aa15.2■□□□□ 0.02
CPSF6-201ENST00000266679 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-201ENST00000266679 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 ADCY5O95622 1261 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 CYP19A1P11511 503 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-201ENST00000266679 HAND2P61296 217 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
CPSF6-201ENST00000266679 MYO5AQ9Y4I1 1855 aaKnown RBP15.19■□□□□ 0.02
CPSF6-201ENST00000266679 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 QSER1Q2KHR3 1735 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 PPFIA3O75145 1194 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 OFD1O75665 1012 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 CTSWP56202 376 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
CPSF6-201ENST00000266679 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.19■□□□□ 0.02
CPSF6-201ENST00000266679 FOXP2O15409 715 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
CPSF6-201ENST00000266679 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 PTGER2P43116 358 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 PLCB2Q00722 1185 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 TTLL11Q8NHH1 800 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 BICD2Q8TD16 824 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 AGXT2Q9BYV1 514 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 DACT1Q9NYF0 836 aa15.18■□□□□ 0.02
CPSF6-201ENST00000266679 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
CPSF6-201ENST00000266679 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 MCM5P33992 734 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 PGBD1Q96JS3 809 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 TRMT112Q9UI30 125 aaKnown RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 RIPOR2Q9Y4F9 1068 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 DDX60Q8IY21 1712 aaKnown RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 KDM4AO75164 1064 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 CKAP2LQ8IYA6 745 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 APPBP2Q92624 585 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 PUS7LQ9H0K6 701 aaKnown RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 GPHNQ9NQX3 736 aaPredicted RBP15.17■□□□□ 0.02
CPSF6-201ENST00000266679 ABCC12Q96J65 1359 aa15.17■□□□□ 0.02
CPSF6-201ENST00000266679 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
CPSF6-201ENST00000266679 MCAMP43121 646 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
CPSF6-201ENST00000266679 CEBPZQ03701 1054 aaKnown RBP15.16■□□□□ 0.02
CPSF6-201ENST00000266679 IMMTQ16891 758 aaKnown RBP15.16■□□□□ 0.02
CPSF6-201ENST00000266679 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 CCNL1Q9UK58 526 aaPredicted RBP15.16■□□□□ 0.02
CPSF6-201ENST00000266679 GUCY1B3Q02153 619 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 TYRO3Q06418 890 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 TBC1D2BQ9UPU7 963 aa15.16■□□□□ 0.02
CPSF6-201ENST00000266679 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 NAA16Q6N069 864 aaPredicted RBP15.15■□□□□ 0.02
CPSF6-201ENST00000266679 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
CPSF6-201ENST00000266679 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 CLSTN2Q9H4D0 955 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 DDX19AQ9NUU7 478 aaKnown RBP15.15■□□□□ 0.02
CPSF6-201ENST00000266679 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 PNPLA7Q6ZV29 1317 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 ARAP2Q8WZ64 1704 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 GPAA1O43292 621 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 NR1I2O75469 434 aa15.15■□□□□ 0.02
CPSF6-201ENST00000266679 FGAP02671 866 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms