RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
VPS41-201ENST00000265745 IRS2Q9Y4H2 1338 aa12.31□□□□□ -0.44
VPS41-201ENST00000265745 NBPF7P0C2Y1 421 aaPredicted RBP12.3□□□□□ -0.44
VPS41-201ENST00000265745 MMP14P50281 582 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
VPS41-201ENST00000265745 GTF2IP78347 998 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 NOGQ13253 232 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 RGMBQ6NW40 437 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 SSH1Q8WYL5 1049 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 CDCA5Q96FF9 252 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 ZNF594Q96JF6 807 aaPredicted RBP12.3□□□□□ -0.44
VPS41-201ENST00000265745 ZIC5Q96T25 663 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 UTYO14607 1347 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
VPS41-201ENST00000265745 WNT10BO00744 389 aa12.29□□□□□ -0.44
VPS41-201ENST00000265745 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
VPS41-201ENST00000265745 CCDC102AQ96A19 550 aa12.29□□□□□ -0.44
VPS41-201ENST00000265745 CDCA7LQ96GN5 454 aa12.29□□□□□ -0.44
VPS41-201ENST00000265745 SUCLG2Q96I99 432 aa12.29□□□□□ -0.44
VPS41-201ENST00000265745 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
VPS41-201ENST00000265745 CA12O43570 354 aa12.28□□□□□ -0.44
VPS41-201ENST00000265745 IL1R1P14778 569 aa12.28□□□□□ -0.44
VPS41-201ENST00000265745 KIAA0825Q8IV33 1275 aa12.28□□□□□ -0.44
VPS41-201ENST00000265745 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
VPS41-201ENST00000265745 SCAF8Q9UPN6 1271 aaKnown RBP12.28□□□□□ -0.44
VPS41-201ENST00000265745 PTPRCP08575 1304 aa12.28□□□□□ -0.44
VPS41-201ENST00000265745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 PLIN1O60240 522 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 ZNF157P51786 506 aaPredicted RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 FKBP1BP68106 108 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 ZNF804AQ7Z570 1209 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 CERS5Q8N5B7 392 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 ZBED3Q96IU2 234 aaPredicted RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
VPS41-201ENST00000265745 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 HDAC9Q9UKV0 1011 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 RIPOR2Q9Y4F9 1068 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 STK24Q9Y6E0 443 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 SCN9AQ15858 1988 aa12.27□□□□□ -0.45
VPS41-201ENST00000265745 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 SASH1O94885 1247 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 UBE4AQ14139 1066 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 PRAMEF18Q5VWM3 479 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 USP44Q9H0E7 712 aa12.26□□□□□ -0.45
VPS41-201ENST00000265745 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
VPS41-201ENST00000265745 SLC10A3P09131 477 aa12.25□□□□□ -0.45
VPS41-201ENST00000265745 PYGBP11216 843 aa12.25□□□□□ -0.45
VPS41-201ENST00000265745 FKBP1AP62942 108 aaKnown RBP12.25□□□□□ -0.45
VPS41-201ENST00000265745 KIF23Q02241 960 aaPredicted RBP12.25□□□□□ -0.45
VPS41-201ENST00000265745 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
VPS41-201ENST00000265745 MOB2Q70IA6 237 aa12.25□□□□□ -0.45
VPS41-201ENST00000265745 MTMR14Q8NCE2 650 aa12.24□□□□□ -0.45
VPS41-201ENST00000265745 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
VPS41-201ENST00000265745 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
VPS41-201ENST00000265745 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
VPS41-201ENST00000265745 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
VPS41-201ENST00000265745 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
VPS41-201ENST00000265745 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
VPS41-201ENST00000265745 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
VPS41-201ENST00000265745 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
VPS41-201ENST00000265745 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
VPS41-201ENST00000265745 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
VPS41-201ENST00000265745 FAM205AQ6ZU69 1335 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 F8W031 263 aaPredicted RBP12.22□□□□□ -0.45
VPS41-201ENST00000265745 NF2P35240 595 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 GYG1P46976 350 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 FBXO33Q7Z6M2 555 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 RASAL3Q86YV0 1011 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 APOBEC3FQ8IUX4 373 aaKnown RBP12.22□□□□□ -0.45
VPS41-201ENST00000265745 ABHD8Q96I13 439 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
VPS41-201ENST00000265745 DEFB129Q9H1M3 183 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 RNF186Q9NXI6 227 aa12.22□□□□□ -0.45
VPS41-201ENST00000265745 TRPA1O75762 1119 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 PDE8BO95263 885 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 CFAP100Q494V2 611 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 SAGE1Q9NXZ1 904 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 NOB1Q9ULX3 412 aaKnown RBP12.21□□□□□ -0.45
VPS41-201ENST00000265745 PCDHAC2Q9Y5I4 1007 aa12.21□□□□□ -0.45
VPS41-201ENST00000265745 THSD7BQ9C0I4 1608 aa12.21□□□□□ -0.46
VPS41-201ENST00000265745 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.46
VPS41-201ENST00000265745 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
VPS41-201ENST00000265745 METTL24Q5JXM2 366 aa12.2□□□□□ -0.46
VPS41-201ENST00000265745 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
VPS41-201ENST00000265745 RYDENQ9NUL5 291 aaKnown RBP12.2□□□□□ -0.46
VPS41-201ENST00000265745 AOX1Q06278 1338 aa12.19□□□□□ -0.46
VPS41-201ENST00000265745 MYO1BO43795 1136 aa12.19□□□□□ -0.46
VPS41-201ENST00000265745 RFX5P48382 616 aaPredicted RBP12.19□□□□□ -0.46
VPS41-201ENST00000265745 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms