RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TTLL5Q6EMB2 1281 aa22.54■■□□□ 1.2
SDF4-201ENST00000263741 SCNN1DP51172 638 aa22.53■■□□□ 1.2
SDF4-201ENST00000263741 TNIP1Q15025 636 aa22.53■■□□□ 1.2
SDF4-201ENST00000263741 CLASRPQ8N2M8 674 aaKnown RBP22.53■■□□□ 1.2
SDF4-201ENST00000263741 RWDD1Q9H446 243 aaPredicted RBP22.53■■□□□ 1.2
SDF4-201ENST00000263741 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
SDF4-201ENST00000263741 PI16Q6UXB8 463 aa22.53■■□□□ 1.2
SDF4-201ENST00000263741 SCARF1Q14162 830 aa22.52■■□□□ 1.2
SDF4-201ENST00000263741 CERS5Q8N5B7 392 aa22.52■■□□□ 1.2
SDF4-201ENST00000263741 RRAGCQ9HB90 399 aa22.52■■□□□ 1.2
SDF4-201ENST00000263741 VIL1P09327 827 aaKnown RBP22.51■■□□□ 1.19
SDF4-201ENST00000263741 RASGRF1Q13972 1273 aa22.51■■□□□ 1.19
SDF4-201ENST00000263741 STRIP1Q5VSL9 837 aa22.51■■□□□ 1.19
SDF4-201ENST00000263741 RSBN1LQ6PCB5 846 aaPredicted RBP22.51■■□□□ 1.19
SDF4-201ENST00000263741 GPBP1L1Q9HC44 474 aaPredicted RBP22.51■■□□□ 1.19
SDF4-201ENST00000263741 POTECB2RU33 542 aa22.51■■□□□ 1.19
SDF4-201ENST00000263741 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
SDF4-201ENST00000263741 ANKRD45Q5TZF3 282 aa22.5■■□□□ 1.19
SDF4-201ENST00000263741 IFIT2P09913 472 aaKnown RBP22.5■■□□□ 1.19
SDF4-201ENST00000263741 TTC39AQ5SRH9 613 aa22.5■■□□□ 1.19
SDF4-201ENST00000263741 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
SDF4-201ENST00000263741 L3MBTL3Q96JM7 780 aaPredicted RBP22.5■■□□□ 1.19
SDF4-201ENST00000263741 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
SDF4-201ENST00000263741 EPS15P42566 896 aa22.49■■□□□ 1.19
SDF4-201ENST00000263741 GRIK5Q16478 980 aa22.49■■□□□ 1.19
SDF4-201ENST00000263741 SMC5Q8IY18 1101 aa22.49■■□□□ 1.19
SDF4-201ENST00000263741 C16orf71Q8IYS4 520 aaPredicted RBP22.49■■□□□ 1.19
SDF4-201ENST00000263741 OTUD7AQ8TE49 926 aaPredicted RBP22.49■■□□□ 1.19
SDF4-201ENST00000263741 FAM205AQ6ZU69 1335 aa22.49■■□□□ 1.19
SDF4-201ENST00000263741 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
SDF4-201ENST00000263741 MCAMP43121 646 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 MFSD14BQ5SR56 506 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 KIAA0825Q8IV33 1275 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 NDUFB9Q9Y6M9 179 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 TSHZ3Q63HK5 1081 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 GPRC5DQ9NZD1 345 aa22.48■■□□□ 1.19
SDF4-201ENST00000263741 ARID4AP29374 1257 aaPredicted RBP22.47■■□□□ 1.19
SDF4-201ENST00000263741 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
SDF4-201ENST00000263741 GMLQ99445 158 aa22.47■■□□□ 1.19
SDF4-201ENST00000263741 HMG20BQ9P0W2 317 aa22.47■■□□□ 1.19
SDF4-201ENST00000263741 LNPKQ9C0E8 428 aa22.46■■□□□ 1.19
SDF4-201ENST00000263741 EGFRP00533 1210 aa22.46■■□□□ 1.19
SDF4-201ENST00000263741 LMOD1P29536 600 aaPredicted RBP22.46■■□□□ 1.19
SDF4-201ENST00000263741 CNOT7Q9UIV1 285 aaKnown RBP22.46■■□□□ 1.19
SDF4-201ENST00000263741 MYH2Q9UKX2 1941 aa22.45■■□□□ 1.18
SDF4-201ENST00000263741 HACL1Q9UJ83 578 aa22.45■■□□□ 1.18
SDF4-201ENST00000263741 DENND2AQ9ULE3 1009 aa22.45■■□□□ 1.18
SDF4-201ENST00000263741 DOCK2Q92608 1830 aa22.45■■□□□ 1.18
SDF4-201ENST00000263741 POLR2AP24928 1970 aaKnown RBP22.45■■□□□ 1.18
SDF4-201ENST00000263741 SPATA5Q8NB90 893 aa22.45■■□□□ 1.18
SDF4-201ENST00000263741 SEMA3EO15041 775 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 UQCRFS1P1P0C7P4 283 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 POTEIP0CG38 1075 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 POTEJP0CG39 1038 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 RPS12P25398 132 aaKnown RBP22.44■■□□□ 1.18
SDF4-201ENST00000263741 SAMD7Q7Z3H4 446 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 AGBL3Q8NEM8 1001 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 TRPM4Q8TD43 1214 aa22.44■■□□□ 1.18
SDF4-201ENST00000263741 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 ECM29Q5VYK3 1845 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 VEGFAP15692 232 aaPredicted RBP22.43■■□□□ 1.18
SDF4-201ENST00000263741 EPHX2P34913 555 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 TBC1D9Q6ZT07 1266 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 TAF1DQ9H5J8 278 aaPredicted RBP22.43■■□□□ 1.18
SDF4-201ENST00000263741 MYO3BQ8WXR4 1341 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 KIF3CO14782 793 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 TBC1D10BQ4KMP7 808 aaPredicted RBP22.43■■□□□ 1.18
SDF4-201ENST00000263741 RBM26Q5T8P6 1007 aaKnown RBP22.43■■□□□ 1.18
SDF4-201ENST00000263741 DPF2Q92785 391 aa22.43■■□□□ 1.18
SDF4-201ENST00000263741 ZBTB47Q9UFB7 747 aaPredicted RBP22.43■■□□□ 1.18
SDF4-201ENST00000263741 IQCA1LA6NCM1 817 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 USP17L8P0C7I0 530 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 PRDX5P30044 214 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 EAPPQ56P03 285 aaPredicted RBP22.42■■□□□ 1.18
SDF4-201ENST00000263741 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 PCDHAC2Q9Y5I4 1007 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 MYH7P12883 1935 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 ZAP70P43403 619 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 WDR66Q8TBY9 1149 aa22.42■■□□□ 1.18
SDF4-201ENST00000263741 TTF2Q9UNY4 1162 aaKnown RBP22.41■■□□□ 1.18
SDF4-201ENST00000263741 NUCB1Q02818 461 aa22.4■■□□□ 1.18
SDF4-201ENST00000263741 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
SDF4-201ENST00000263741 TBC1D22AQ8WUA7 517 aa22.4■■□□□ 1.18
SDF4-201ENST00000263741 H7C1D1 291 aa22.4■■□□□ 1.18
SDF4-201ENST00000263741 FKBP1AP62942 108 aaKnown RBP22.4■■□□□ 1.18
SDF4-201ENST00000263741 EDC3Q96F86 508 aaKnown RBP22.4■■□□□ 1.18
SDF4-201ENST00000263741 ZNF512BQ96KM6 892 aaPredicted RBP22.4■■□□□ 1.18
SDF4-201ENST00000263741 DNAJC2Q99543 621 aaKnown RBP22.4■■□□□ 1.18
SDF4-201ENST00000263741 BOLA2Q9H3K6 86 aa22.4■■□□□ 1.18
SDF4-201ENST00000263741 PDS5AQ29RF7 1337 aaKnown RBP22.39■■□□□ 1.18
SDF4-201ENST00000263741 CYP2E1P05181 493 aaPredicted RBP22.39■■□□□ 1.17
SDF4-201ENST00000263741 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.17
SDF4-201ENST00000263741 ANTXR1Q9H6X2 564 aa22.39■■□□□ 1.17
SDF4-201ENST00000263741 ADARB2Q9NS39 739 aaKnown RBP22.39■■□□□ 1.17
SDF4-201ENST00000263741 ASTN2O75129 1339 aaPredicted RBP22.39■■□□□ 1.17
SDF4-201ENST00000263741 SALL3Q9BXA9 1300 aa22.39■■□□□ 1.17
SDF4-201ENST00000263741 HIRAP54198 1017 aaPredicted RBP22.38■■□□□ 1.17
SDF4-201ENST00000263741 ZNF280AP59817 542 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 417.4 ms