RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 GMLQ99445 158 aa11.8□□□□□ -0.52
TTC39A-201ENST00000262675 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
TTC39A-201ENST00000262675 PHAXQ9H814 394 aaKnown RBP11.8□□□□□ -0.52
TTC39A-201ENST00000262675 BSDC1Q9NW68 430 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-201ENST00000262675 RNF186Q9NXI6 227 aa11.8□□□□□ -0.52
TTC39A-201ENST00000262675 PTPRCP08575 1304 aa11.8□□□□□ -0.52
TTC39A-201ENST00000262675 EGFRP00533 1210 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
TTC39A-201ENST00000262675 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 CHMP5Q9NZZ3 219 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 COL4A1P02462 1669 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 MFAP1P55081 439 aaKnown RBP11.79□□□□□ -0.52
TTC39A-201ENST00000262675 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
TTC39A-201ENST00000262675 INTS3Q68E01 1043 aaKnown RBP11.79□□□□□ -0.52
TTC39A-201ENST00000262675 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
TTC39A-201ENST00000262675 TSPYL6Q8N831 410 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
TTC39A-201ENST00000262675 RASAL3Q86YV0 1011 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-201ENST00000262675 ANKRD2Q9GZV1 360 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 TRPA1O75762 1119 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 MAP3K2Q9Y2U5 619 aa11.78□□□□□ -0.52
TTC39A-201ENST00000262675 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 IGHMBP2P38935 993 aaKnown RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 APOBEC3FQ8IUX4 373 aaKnown RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-201ENST00000262675 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.53
TTC39A-201ENST00000262675 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-201ENST00000262675 PTMSP20962 102 aa11.76□□□□□ -0.53
TTC39A-201ENST00000262675 SREBF2Q12772 1141 aa11.76□□□□□ -0.53
TTC39A-201ENST00000262675 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
TTC39A-201ENST00000262675 PLA2G12BQ9BX93 195 aa11.76□□□□□ -0.53
TTC39A-201ENST00000262675 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
TTC39A-201ENST00000262675 SPEF2Q9C093 1822 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 DACT2Q5SW24 774 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 PI4KAP2A4QPH2 592 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 PI4KAP1Q8N8J0 262 aa11.75□□□□□ -0.53
TTC39A-201ENST00000262675 ZNF646O15015 1829 aaPredicted RBP11.75□□□□□ -0.53
TTC39A-201ENST00000262675 NEURL1BA8MQ27 555 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 H7C1W4 665 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 IGKV5-2P06315 115 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 TM4SF4P48230 202 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-201ENST00000262675 CDC45O75419 566 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-201ENST00000262675 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
TTC39A-201ENST00000262675 GREM2Q9H772 168 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
TTC39A-201ENST00000262675 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
TTC39A-201ENST00000262675 INHBEP58166 350 aa11.73□□□□□ -0.53
TTC39A-201ENST00000262675 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
TTC39A-201ENST00000262675 ZNF804BA4D1E1 1349 aa11.73□□□□□ -0.53
TTC39A-201ENST00000262675 WNT10BO00744 389 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 MCM4P33991 863 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 KCNJ4P48050 445 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 HMMRO75330 724 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
TTC39A-201ENST00000262675 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
TTC39A-201ENST00000262675 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
TTC39A-201ENST00000262675 ISY1Q9ULR0 285 aaKnown RBP11.72□□□□□ -0.53
TTC39A-201ENST00000262675 CSF1RP07333 972 aa11.71□□□□□ -0.53
TTC39A-201ENST00000262675 ITGA6P23229 1130 aa11.71□□□□□ -0.53
TTC39A-201ENST00000262675 GCKRQ14397 625 aa11.71□□□□□ -0.53
TTC39A-201ENST00000262675 MTMR14Q8NCE2 650 aa11.71□□□□□ -0.53
TTC39A-201ENST00000262675 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
TTC39A-201ENST00000262675 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
TTC39A-201ENST00000262675 ANKRD18BA2A2Z9 1011 aa11.71□□□□□ -0.54
TTC39A-201ENST00000262675 UBE2Q2LH0YL09 131 aa11.71□□□□□ -0.54
TTC39A-201ENST00000262675 MYO1BO43795 1136 aa11.71□□□□□ -0.54
TTC39A-201ENST00000262675 DDIT3P35638 169 aa11.71□□□□□ -0.54
TTC39A-201ENST00000262675 LAMB1P07942 1786 aa11.71□□□□□ -0.54
TTC39A-201ENST00000262675 MANSC4A6NHS7 340 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-201ENST00000262675 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
TTC39A-201ENST00000262675 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms