RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 SALL3Q9BXA9 1300 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 MCAMP43121 646 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 SCARF1Q14162 830 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 DPY19L2Q6NUT2 758 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 GPC2Q8N158 579 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 HMG20BQ9P0W2 317 aa20.34■□□□□ 0.85
CHCHD3-201ENST00000262570 PDS5AQ29RF7 1337 aaKnown RBP20.33■□□□□ 0.85
CHCHD3-201ENST00000262570 COL1A1P02452 1464 aaPredicted RBP20.33■□□□□ 0.84
CHCHD3-201ENST00000262570 GLTPD2A6NH11 291 aa20.33■□□□□ 0.84
CHCHD3-201ENST00000262570 FBXW7Q969H0 707 aa20.33■□□□□ 0.84
CHCHD3-201ENST00000262570 JAG2Q9Y219 1238 aa20.33■□□□□ 0.84
CHCHD3-201ENST00000262570 DDNO94850 711 aaPredicted RBP20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 ATP5JP18859 108 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 MX1P20591 662 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 PI16Q6UXB8 463 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 SPATA5Q8NB90 893 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
CHCHD3-201ENST00000262570 FKBP1AP62942 108 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-201ENST00000262570 RSBN1LQ6PCB5 846 aaPredicted RBP20.31■□□□□ 0.84
CHCHD3-201ENST00000262570 WDR66Q8TBY9 1149 aa20.31■□□□□ 0.84
CHCHD3-201ENST00000262570 STAP2Q9UGK3 403 aa20.31■□□□□ 0.84
CHCHD3-201ENST00000262570 GJA3Q9Y6H8 435 aa20.31■□□□□ 0.84
CHCHD3-201ENST00000262570 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
CHCHD3-201ENST00000262570 TBC1D22AQ8WUA7 517 aa20.3■□□□□ 0.84
CHCHD3-201ENST00000262570 MXD3Q9BW11 206 aa20.3■□□□□ 0.84
CHCHD3-201ENST00000262570 ZBTB12Q9Y330 459 aaPredicted RBP20.3■□□□□ 0.84
CHCHD3-201ENST00000262570 PDE4AP27815 886 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 PDE1AP54750 535 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 MFSD14BQ5SR56 506 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 GMLQ99445 158 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 SNRKQ9NRH2 765 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 SALL1Q9NSC2 1324 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 RPS12P25398 132 aaKnown RBP20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 ZAP70P43403 619 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 AGBL3Q8NEM8 1001 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 PSME4Q14997 1843 aa20.29■□□□□ 0.84
CHCHD3-201ENST00000262570 MYO3BQ8WXR4 1341 aa20.28■□□□□ 0.84
CHCHD3-201ENST00000262570 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
CHCHD3-201ENST00000262570 DPF2Q92785 391 aa20.28■□□□□ 0.84
CHCHD3-201ENST00000262570 L3MBTL3Q96JM7 780 aaPredicted RBP20.28■□□□□ 0.84
CHCHD3-201ENST00000262570 ERC2O15083 957 aa20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 CYP2E1P05181 493 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 HAUS7Q99871 368 aa20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 OSBPL3Q9H4L5 887 aa20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 ZNF646O15015 1829 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
CHCHD3-201ENST00000262570 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-201ENST00000262570 SCNN1DP51172 638 aa20.26■□□□□ 0.83
CHCHD3-201ENST00000262570 SUGT1Q9Y2Z0 365 aa20.26■□□□□ 0.83
CHCHD3-201ENST00000262570 GTF3C3Q9Y5Q9 886 aa20.26■□□□□ 0.83
CHCHD3-201ENST00000262570 GRIK5Q16478 980 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 ZGPATQ8N5A5 531 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 AOX1Q06278 1338 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 PRDX5P30044 214 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 KIAA0825Q8IV33 1275 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 ABCF2Q9UG63 623 aa20.25■□□□□ 0.83
CHCHD3-201ENST00000262570 MYH13Q9UKX3 1938 aa20.24■□□□□ 0.83
CHCHD3-201ENST00000262570 ANTXR1Q9H6X2 564 aa20.24■□□□□ 0.83
CHCHD3-201ENST00000262570 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
CHCHD3-201ENST00000262570 CNOT7Q9UIV1 285 aaKnown RBP20.24■□□□□ 0.83
CHCHD3-201ENST00000262570 LDHBP07195 334 aaKnown RBP20.23■□□□□ 0.83
CHCHD3-201ENST00000262570 USP17L8P0C7I0 530 aa20.23■□□□□ 0.83
CHCHD3-201ENST00000262570 SPTY2D1Q68D10 685 aaPredicted RBP20.23■□□□□ 0.83
CHCHD3-201ENST00000262570 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
CHCHD3-201ENST00000262570 PAG1Q9NWQ8 432 aa20.23■□□□□ 0.83
CHCHD3-201ENST00000262570 POTECB2RU33 542 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 F8W031 263 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 GOLIM4O00461 696 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 YY1P25490 414 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 MMP14P50281 582 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 TTF1Q15361 905 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 SKAP1Q86WV1 359 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 MICALL2Q8IY33 904 aa20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 EDC3Q96F86 508 aaKnown RBP20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
CHCHD3-201ENST00000262570 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 EPS15P42566 896 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 ZNF280AP59817 542 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 OGFOD1Q8N543 542 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 LRP2BPQ9P2M1 347 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 IGSF3O75054 1194 aa20.21■□□□□ 0.83
CHCHD3-201ENST00000262570 LMOD1P29536 600 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms